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SCNpilot_P_inoc_Microbacterium_69_20

SCNpilot_P_inoc_Microbacterium_69_20 SCNpilot_P_inoc_Microbacterium_70_16
In projects: SCNpilot_P_inoc  |  SCN_92

Consensus taxonomy: Microbacterium  →  Actinomycetales  →  Actinobacteridae  →  Actinobacteria  →  Bacteria

Description

curate, contains high-coverage core genes

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Min-Max Range: 64.38 - 71.92

Min-Max Range: 13.57 - 52.96

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Displaying 29 items
Contig (seq size) Coding Density (%) Species Genus Order Class Phylum Domain Other Binning
scnpilot_p_inoc_scaffold_31
617369 bp | 14.45 x | 69.80%
0.938502
Microbacterium ho...
23.39%
Microbacterium
90.93%
Micrococcales
94.76%
Actinobacteria
97.91%
Actinobacteria
98.78%
Bacteria
99.30%
24 (abawaca)
scnpilot_p_inoc_scaffold_98
298847 bp | 14.62 x | 69.67%
0.918008
Microbacterium sp...
14.39%
Microbacterium
75.28%
Micrococcales
83.76%
Actinobacteria
92.62%
Actinobacteria
95.20%
Bacteria
96.31%
24 (abawaca)
scnpilot_p_inoc_scaffold_200
293590 bp | 14.37 x | 69.55%
0.924023
Microbacterium ho...
16.41%
Microbacterium
79.01%
Micrococcales
89.31%
Actinobacteria
93.51%
Actinobacteria
94.66%
Bacteria
96.18%
24 (abawaca)
scnpilot_p_inoc_scaffold_204
288479 bp | 14.99 x | 70.37%
0.914323
Microbacterium sp...
12.55%
Microbacterium
74.12%
Micrococcales
82.35%
Actinobacteria
90.98%
Actinobacteria
91.76%
Bacteria
96.86%
24 (abawaca)
scnpilot_p_inoc_scaffold_89
245425 bp | 15.24 x | 70.05%
0.917388
Microbacterium ho...
19.46%
Microbacterium
82.35%
Micrococcales
89.59%
Actinobacteria
94.12%
Actinobacteria
95.48%
Bacteria
98.19%
24 (abawaca)
scnpilot_p_inoc_scaffold_182
238367 bp | 14.81 x | 69.67%
0.929223
Microbacterium ho...
18.87%
Microbacterium
94.81%
Micrococcales
97.17%
Actinobacteria
98.58%
Actinobacteria
99.06%
Bacteria
99.06%
24 (abawaca)
scnpilot_p_inoc_scaffold_99
237459 bp | 14.80 x | 70.06%
0.931272
Microbacterium ho...
19.53%
Microbacterium
89.77%
Micrococcales
96.28%
Actinobacteria
98.60%
Actinobacteria
98.60%
Bacteria
99.07%
24 (abawaca)
scnpilot_p_inoc_scaffold_253
130601 bp | 13.63 x | 69.40%
0.910881
Microbacterium ho...
18.55%
Microbacterium
76.61%
Micrococcales
83.87%
Actinobacteria
94.35%
Actinobacteria
95.97%
Bacteria
96.77%
24 (abawaca)
scnpilot_p_inoc_scaffold_392
125873 bp | 14.24 x | 70.11%
0.898572
Microbacterium ho...
24.14%
Microbacterium
96.55%
Micrococcales
96.55%
Actinobacteria
98.28%
Actinobacteria
98.28%
Bacteria
100.00%
24 (abawaca)
scnpilot_p_inoc_scaffold_393
93613 bp | 14.10 x | 66.39%
0.889107
Microbacterium sp...
24.75%
Microbacterium
67.33%
Micrococcales
82.18%
Actinobacteria
94.06%
Actinobacteria
96.04%
Bacteria
97.03%
24 (abawaca)
scnpilot_p_inoc_scaffold_651
91113 bp | 16.16 x | 70.20%
0.901584
Microbacterium ho...
21.25%
Microbacterium
93.75%
Micrococcales
97.50%
Actinobacteria
97.50%
Actinobacteria
97.50%
Bacteria
98.75%
24 (abawaca)
scnpilot_p_inoc_scaffold_866
57715 bp | 35.14 x | 67.07%
0.889994
Microbacterium la...
22.39%
Microbacterium
88.06%
Micrococcales
94.03%
Actinobacteria
94.03%
Actinobacteria
94.03%
Bacteria
97.01%
24 (abawaca)
scnpilot_p_inoc_scaffold_608
56764 bp | 14.48 x | 69.71%
0.896818
Microbacterium sp...
12.68%
Microbacterium
61.97%
Micrococcales
73.24%
Actinobacteria
94.37%
Actinobacteria
94.37%
Bacteria
95.77%
24 (abawaca)
scnpilot_p_inoc_scaffold_661
56181 bp | 15.01 x | 68.86%
0.936669
Microbacterium sp...
19.30%
Microbacterium
92.98%
Micrococcales
92.98%
Actinobacteria
92.98%
Actinobacteria
98.25%
Bacteria
98.25%
24 (abawaca)
scnpilot_p_inoc_scaffold_835
41473 bp | 16.06 x | 69.28%
0.88431
Microbacterium sp...
17.14%
Microbacterium
57.14%
Micrococcales
74.29%
Actinobacteria
85.71%
Actinobacteria
94.29%
Bacteria
97.14%
24 (abawaca)
scnpilot_p_inoc_scaffold_824
39810 bp | 15.06 x | 68.06%
0.902487
Microbacterium ho...
37.50%
Microbacterium
96.88%
Micrococcales
100.00%
Actinobacteria
100.00%
Actinobacteria
100.00%
Bacteria
100.00%
24 (abawaca)
scnpilot_p_inoc_scaffold_974
32733 bp | 15.38 x | 68.15%
0.884978
Microbacterium sp...
21.88%
Microbacterium
96.88%
Micrococcales
100.00%
Actinobacteria
100.00%
Actinobacteria
100.00%
Bacteria
100.00%
24 (abawaca)
scnpilot_p_inoc_scaffold_1108
28907 bp | 52.96 x | 68.56%
0.919916
unknown
25.00%
Microbacterium
56.25%
Micrococcales
56.25%
Actinobacteria
62.50%
Actinobacteria
62.50%
Bacteria
68.75%
24 (abawaca)
scnpilot_p_inoc_scaffold_1091
28291 bp | 14.44 x | 70.45%
0.916298
Microbacterium ho...
40.91%
Microbacterium
100.00%
Micrococcales
100.00%
Actinobacteria
100.00%
Actinobacteria
100.00%
Bacteria
100.00%
24 (abawaca)
scnpilot_p_inoc_scaffold_1640
24876 bp | 50.86 x | 66.63%
0.906536
Propionibacterium...
27.27%
Propionibacterium
27.27%
Propionibacteriales
50.00%
Actinobacteria
90.91%
Actinobacteria
90.91%
Bacteria
90.91%
24 (abawaca)
scnpilot_p_inoc_scaffold_1271
23798 bp | 15.55 x | 71.76%
0.935247
Microbacterium sp...
33.33%
Microbacterium
100.00%
Micrococcales
100.00%
Actinobacteria
100.00%
Actinobacteria
100.00%
Bacteria
100.00%
24 (abawaca)
scnpilot_p_inoc_scaffold_1444
20668 bp | 22.35 x | 69.66%
0.925198
Microbacterium gi...
100.00%
Microbacterium
100.00%
Micrococcales
100.00%
Actinobacteria
100.00%
Actinobacteria
100.00%
Bacteria
100.00%
24 (abawaca)
scnpilot_p_inoc_scaffold_3077
13345 bp | 15.60 x | 67.15%
0.936531
Microbacterium gi...
58.82%
Microbacterium
88.24%
Micrococcales
94.12%
Actinobacteria
94.12%
Actinobacteria
94.12%
Bacteria
94.12%
24 (abawaca)
scnpilot_p_inoc_scaffold_2589
12156 bp | 21.20 x | 65.33%
0.943485
Cryobacterium sp....
33.33%
Cryobacterium
33.33%
Micrococcales
75.00%
Actinobacteria
83.33%
Actinobacteria
83.33%
Bacteria
91.67%
24 (abawaca)
scnpilot_p_inoc_scaffold_3417
10382 bp | 15.62 x | 65.64%
0.915142
Propionibacterium...
20.00%
Microbacterium
50.00%
Micrococcales
60.00%
Actinobacteria
100.00%
Actinobacteria
100.00%
Bacteria
100.00%
24 (abawaca)
scnpilot_p_inoc_scaffold_6739
6188 bp | 13.57 x | 67.37%
0.886231
Microbacterium gi...
42.86%
Microbacterium
42.86%
Micrococcales
57.14%
Actinobacteria
85.71%
Actinobacteria
85.71%
Bacteria
85.71%
24 (abawaca)
scnpilot_p_inoc_scaffold_12581
5998 bp | 19.61 x | 71.92%
0.902301
Microbacterium la...
50.00%
Microbacterium
87.50%
Micrococcales
87.50%
Actinobacteria
87.50%
Actinobacteria
87.50%
Bacteria
87.50%
24 (abawaca)
scnpilot_p_inoc_scaffold_8679
5179 bp | 50.40 x | 64.38%
0.893802
Microbacterium gi...
33.33%
Microbacterium
50.00%
Micrococcales
83.33%
Actinobacteria
100.00%
Actinobacteria
100.00%
Bacteria
100.00%
24 (abawaca)
scnpilot_p_inoc_scaffold_17125
4720 bp | 19.58 x | 70.97%
0.985805
Microbacterium sp...
75.00%
Microbacterium
100.00%
Micrococcales
100.00%
Actinobacteria
100.00%
Actinobacteria
100.00%
Bacteria
100.00%
24 (abawaca)
Displaying 29 items