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scnpilot_p_inoc_scaffold_252_10

Organism: SCNpilot_P_inoc_Niastella_45_30

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 13 / 38
Location: 9582..10220

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, LuxR family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8W1_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 36.5
  • Coverage: 211.0
  • Bit_score: 153
  • Evalue 1.90e-34
two component transcriptional regulator, LuxR family similarity KEGG
DB: KEGG
  • Identity: 36.5
  • Coverage: 211.0
  • Bit_score: 153
  • Evalue 5.40e-35
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:AEW02318.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 36.5
  • Coverage: 211.0
  • Bit_score: 153
  • Evalue 2.70e-34

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Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 639
ATGAATCCGATCCGCTTACTGCTGGTAGATCCTCACCAGCTATTGCTTGATGCATGGTCTCATTTCTTCACTTCCGTTAAAGGGTTTGATATAATCGGTAAAGCCACAGGCGTGGCACAGGCCCTGCATTTTCTTGATACCAACGATGCCGATGTGGTGATGATGGAAATGCCCGCTGATCCCGCCCGGGGCCTGGATGATATCCGGCAGTTCAGAGCCGGATATGACCGCGCAGCCCTCGTGGCTCTTTCCCCTTATCATACTGTTGCCTATGCCAAAAGCATTTTACAGGCCGGTGCCCGTGCATTTGTTACCAAAAATTCGCCACAGGAAGAGTTGCTCGAAGCGCTTCGCCAGGTGTATGCGGGACAGAAATATGTATGCCGGGAAATAAAGGATCGCCTTACTCAGGAGCAACTTTCGGGTGAGGATCCTTTTATTCCTTTATTAGAAACCCTTTCCAAAAGAGAGAAACAGGTAGTATCCATGGTAAGGCAGGGACTTTCTTCACGCGAAATTGCTGAACTGCTGGAAGTGAGCGCCAAAACGATTGAAGTACACCGCTACCGCATATTACAAAAGACAGGTATGCCCAATACGGCCGCACTTGTGCATCTGTTTAGCTCACGCGGCTGGTAG
PROTEIN sequence
Length: 213
MNPIRLLLVDPHQLLLDAWSHFFTSVKGFDIIGKATGVAQALHFLDTNDADVVMMEMPADPARGLDDIRQFRAGYDRAALVALSPYHTVAYAKSILQAGARAFVTKNSPQEELLEALRQVYAGQKYVCREIKDRLTQEQLSGEDPFIPLLETLSKREKQVVSMVRQGLSSREIAELLEVSAKTIEVHRYRILQKTGMPNTAALVHLFSSRGW*