ggKbase home page

scnpilot_p_inoc_scaffold_252

Search features with annotation key words

Displaying items 1-30 of 123 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_252_1
unknown

Not on your lists

comp(18..149)
DNA (132bp) protein (44aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_252_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(317..1156)
DNA (840bp) protein (280aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000382CC8D
dienelactone hydrolase
Dienelactone hydrolase {ECO:0000313|EMBL:AEV97534.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Nia
scnpilot_p_inoc_scaffold_252_3
Vibrio sp. JCM 19241, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1212..2003
DNA (792bp) protein (264aa)
Aspartate racemase {ECO:0000313|EMBL:GAM73364.1}; EC=5.1.1.13 {ECO:0000313|EMBL:GAM73364.1};; TaxID=1481919 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;"
aspartate racemase (EC:5.1.1.13)
Aspartate racemase n=1 Tax=Bacillus nealsonii AAU1 RepID=R9C590_9BACI
scnpilot_p_inoc_scaffold_252_4
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(2706..3410)
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00037001FF
Uncharacterized protein {ECO:0000313|EMBL:CCH55374.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
hypothetical protein
scnpilot_p_inoc_scaffold_252_5
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3656..4765)
DNA (1110bp) protein (370aa)
Putative glutamate--cysteine ligase 2 {ECO:0000256|HAMAP-Rule:MF_01609}; EC=6.3.2.2 {ECO:0000256|HAMAP-Rule:MF_01609};; Gamma-glutamylcysteine synthetase 2 {ECO:0000256|HAMAP-Rule:MF_01609}; TaxID=929
Carboxylate-amine ligase NiasoDRAFT_1807 n=1 Tax=Niabella soli DSM 19437 RepID=H1NTN1_9SPHI rbh
carboxylate-amine ligase
scnpilot_p_inoc_scaffold_252_6
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4816..5766)
DNA (951bp) protein (317aa)
glutathione synthase n=1 Tax=Niabella aurantiaca RepID=UPI00037E5F48 rbh
glutathione synthase
Glutathione synthase {ECO:0000313|EMBL:AHF16816.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;
scnpilot_p_inoc_scaffold_252_7
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6132..6944
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000370BF76
esterase
Esterase {ECO:0000313|EMBL:AHF16817.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
scnpilot_p_inoc_scaffold_252_8
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6941..7951)
DNA (1011bp) protein (337aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000360FFDB rbh
Uncharacterized protein {ECO:0000313|EMBL:KIC90423.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
hypothetical protein
scnpilot_p_inoc_scaffold_252_9
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8997..9377
DNA (381bp) protein (127aa)
Two-component system response regulator id=4524000 bin=GWF2_Bacteroidetes_38_335 species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
LytTR family two component transcriptional regulator Tax=GWF2_Bacteroidetes_38_335_curated
chemotaxis protein CheY
scnpilot_p_inoc_scaffold_252_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9582..10220
DNA (639bp) protein (213aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8W1_NIAKG
two component transcriptional regulator, LuxR family
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:AEW02318.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;"
scnpilot_p_inoc_scaffold_252_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10389..11045)
DNA (657bp) protein (219aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK19_NIAKG
two component transcriptional regulator, LuxR family
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:AEW02957.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;"
scnpilot_p_inoc_scaffold_252_12
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11035..11808)
DNA (774bp) protein (258aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; N
Putative signal transduction histidine kinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK18_NIAKG
putative signal transduction histidine kinase
scnpilot_p_inoc_scaffold_252_13
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12266..12646
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NKB6_9SPHI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF18113.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 1943
scnpilot_p_inoc_scaffold_252_14
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12665..13324
DNA (660bp) protein (220aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037CE4FB
Uncharacterized protein {ECO:0000313|EMBL:GAO42657.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
hypothetical protein
scnpilot_p_inoc_scaffold_252_15
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13285..14031
DNA (747bp) protein (249aa)
Putative signal transduction histidine kinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK18_NIAKG
Putative two-component histidine kinase {ECO:0000313|EMBL:GAO44882.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source
putative signal transduction histidine kinase
scnpilot_p_inoc_scaffold_252_16
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14035..14703
DNA (669bp) protein (223aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK19_NIAKG
two component transcriptional regulator, LuxR family
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:AEW02957.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;"
scnpilot_p_inoc_scaffold_252_17
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15091..15684)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TF97_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV97307.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Ni
scnpilot_p_inoc_scaffold_252_18
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15940..16710)
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000369CCBC
Histidine kinase {ECO:0000313|EMBL:KIA95813.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis
signal transduction histidine kinase LytS
scnpilot_p_inoc_scaffold_252_19
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16736..18046)
DNA (1311bp) protein (437aa)
GCN5-related N-acetyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGV8_NIAKG rbh
Uncharacterized protein {ECO:0000313|EMBL:KIC93047.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
N-acetyltransferase GCN5
scnpilot_p_inoc_scaffold_252_20
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

18316..18714
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003727E9E
Glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:AEI51642.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella sl
scnpilot_p_inoc_scaffold_252_21
BJP_08E140C01_Flavobacteriales_35_8, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18793..19605)
DNA (813bp) protein (271aa)
peptidase M48 n=1 Tax=Marinilabilia salmonicolor RepID=UPI00029B4E54
peptidase M48, Ste24p
Tax=BJP_08E140C01_Flavobacteriales_35_8
scnpilot_p_inoc_scaffold_252_22
Microscilla marina, Microscilla, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(19794..22598)
DNA (2805bp) protein (935aa)
Putative zinc protease n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZSQ3_9BACT
Putative zinc protease {ECO:0000313|EMBL:EAY26633.1}; TaxID=313606 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Microscilla.;" source="Microscilla marina ATCC 23134.;"
peptidase m16 domain protein
scnpilot_p_inoc_scaffold_252_23
unknown

Not on your lists

comp(22733..23518)
DNA (786bp) protein (262aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_252_24
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(23553..24935)
DNA (1383bp) protein (461aa)
HtrA2 peptidase {ECO:0000313|EMBL:CCH53319.1}; EC=3.4.21.108 {ECO:0000313|EMBL:CCH53319.1};; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" sourc
HtrA2 peptidase n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GHE4_9BACT rbh
PDZ/DHR/GLGF domain-containing protein
scnpilot_p_inoc_scaffold_252_25
unknown

Not on your lists

comp(25232..25663)
DNA (432bp) protein (144aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_252_26
alpha proteobacterium Q-1, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25801..26793)
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Pseudomonas mosselii SJ10 RepID=V6UNV4_9PSED
Uncharacterized protein {ECO:0000313|EMBL:GAK32425.1}; Flags: Precursor;; TaxID=1492281 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium Q-1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_252_27
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26841..27320)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUP8_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU61046.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source=
scnpilot_p_inoc_scaffold_252_28
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(27342..29798)
DNA (2457bp) protein (819aa)
TonB-dependent receptor n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GMU7_9BACT rbh
TonB-dependent receptor {ECO:0000313|EMBL:CCH55225.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
TonB-dependent receptor
scnpilot_p_inoc_scaffold_252_29
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30072..30974)
DNA (903bp) protein (301aa)
Transcriptional regulator, AraC family protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZGX1_9BACT
AraC family transcriptional regulator Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
AraC family transcriptional regulator
scnpilot_p_inoc_scaffold_252_30
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

31295..32995
DNA (1701bp) protein (567aa)
Uncharacterized protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L3N8_HALH1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE53988.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobact
Displaying items 1-30 of 123 in total

View Taxonomy