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scnpilot_p_inoc_scaffold_252_11

Organism: SCNpilot_P_inoc_Niastella_45_30

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 13 / 38
Location: comp(10389..11045)

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, LuxR family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK19_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 212.0
  • Bit_score: 213
  • Evalue 1.60e-52
two component transcriptional regulator, LuxR family similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 212.0
  • Bit_score: 213
  • Evalue 4.50e-53
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:AEW02957.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.0
  • Coverage: 212.0
  • Bit_score: 213
  • Evalue 2.20e-52

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Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 657
ATGCCAATTAAAGTAATGATAGCCGACGATCATGCTATTTTCAGAGACGGATTCAGGTTGCTGCTAAAAGATCAGCACGACGCGTTGCTGGTAGGTGAAGCGGCAAACGGACGCGAACTCATTCAGCGGGTAGAAGAGCTGCATCCCAACATCGTGATAACCGATATCAAAATGCCCGATACGGATGGTATTGAGCTCTGCCGCCAGTTGCGTACCCATTATCCTGAAGTGGATGTGATTGCTTTATCTATGTTTAGCGACGATCACCTGATTGCAGACATGCTGGAGGCAGGGGCTAAAGGTTATTTACTAAAGAATACTAACCGCATCGAACTGCTGCAGGCCATCCGTACCGTATTTGATGGAGGCACCTATTACTCACCTGCCACTGGCGAAAAGCTGGCTCGCCTGATCGGCAAAAACAAGTTTCAGTTACCCAAAAAACAACTCAGCGTAAGGTTTAGTGCGCGGGAAAAAGAGATTCTCCAACTCATCTGCGAACAATATACCACCCGTGAAATAGCAGGTGCATTGAATCTGAGTATCCGCACAATCGAATCATACCGGCTTAGTCTGCATGAAAAAACCCGTTCACGCAATTCGATCGGCGTTGTCATCTACGCCATCAGAAACGGTCTGTTTCCCCTGAATGAATAA
PROTEIN sequence
Length: 219
MPIKVMIADDHAIFRDGFRLLLKDQHDALLVGEAANGRELIQRVEELHPNIVITDIKMPDTDGIELCRQLRTHYPEVDVIALSMFSDDHLIADMLEAGAKGYLLKNTNRIELLQAIRTVFDGGTYYSPATGEKLARLIGKNKFQLPKKQLSVRFSAREKEILQLICEQYTTREIAGALNLSIRTIESYRLSLHEKTRSRNSIGVVIYAIRNGLFPLNE*