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scnpilot_p_inoc_scaffold_40

Search features with annotation key words

Displaying items 61-90 of 299 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_40_61
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

61656..62948
DNA (1293bp) protein (431aa)
Nucleoside-diphosphate-sugar epimerase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4W0H9_9GAMM
Epimerase {ECO:0000313|EMBL:EYR70180.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
putative nucleoside-diphosphate sugar epimerase
scnpilot_p_inoc_scaffold_40_62
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

62951..63415
DNA (465bp) protein (155aa)
Integral membrane-like protein n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WPU6_PSEUU
Membrane protein {ECO:0000313|EMBL:EYR70179.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;
hypothetical protein
scnpilot_p_inoc_scaffold_40_63
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(63418..64167)
DNA (750bp) protein (250aa)
Oxidoreductase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WBY5_9GAMM rbh
Oxidoreductase {ECO:0000313|EMBL:EIL96976.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydan
short-chain alcohol dehydrogenase
scnpilot_p_inoc_scaffold_40_64
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(64167..64868)
DNA (702bp) protein (234aa)
Cell division protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WBY4_9GAMM
Cell division protein {ECO:0000313|EMBL:EIL96975.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thi
cell division protein
scnpilot_p_inoc_scaffold_40_65
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(64891..66573)
DNA (1683bp) protein (561aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=1475481 species="Bacteria; Pro
arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase n=1 Tax=Rhodanobacter denitrificans RepID=I4WGW8_9GAMM rbh
scnpilot_p_inoc_scaffold_40_66

Not on your lists

comp(66877..67542)
DNA (666bp) protein (222aa)
DNA repair protein radc n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VKW2_9GAMM
DNA repair protein RadC {ECO:0000313|EMBL:EQD30507.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
DNA repair protein
scnpilot_p_inoc_scaffold_40_67
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

67692..68267
DNA (576bp) protein (192aa)
coaBC; coA biosynthesis protein CoABC (EC:4.1.1.36 6.3.2.5)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035E73C8
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase {ECO:0000313|EMBL:KGQ20135.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xant
scnpilot_p_inoc_scaffold_40_68
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

68257..68931
DNA (675bp) protein (225aa)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase n=1 Tax=Rhodanobacter denitrificans RepID=I4WGW6_9GAMM
phosphopantothenoylcysteine decarboxylase
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase {ECO:0000313|EMBL:EIL88076.1}; Flags: Fragment;; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xa
scnpilot_p_inoc_scaffold_40_69
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

68928..69395
DNA (468bp) protein (156aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule
deoxyuridine 5'-triphosphate nucleotidohydrolase Dut (EC:3.6.1.23)
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Rhodanobacter denitrificans RepID=M4NJ28_9GAMM
scnpilot_p_inoc_scaffold_40_70
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

69397..71805
DNA (2409bp) protein (803aa)
Phosphomannomutase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VKW5_9GAMM
Phosphoglucomutase {ECO:0000313|EMBL:GAN45186.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter se
phosphoglucomutase
scnpilot_p_inoc_scaffold_40_71
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(72308..72940)
DNA (633bp) protein (211aa)
id=1911522 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
id=1911522 bin=GWD2_RBX1-related_39_127 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
scnpilot_p_inoc_scaffold_40_72
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(73513..74241)
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VWK7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL91598.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
hypothetical protein
scnpilot_p_inoc_scaffold_40_73
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

74375..75118
DNA (744bp) protein (248aa)
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WF95_9GAMM rbh
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512}; Short=BPG-dependent PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=PGAM {ECO
gpmA; phosphoglyceromutase
scnpilot_p_inoc_scaffold_40_74
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(75252..77099)
DNA (1848bp) protein (616aa)
Probable protein kinase UbiB {ECO:0000256|SAAS:SAAS00063507}; EC=2.7.-.- {ECO:0000256|SAAS:SAAS00063486};; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xantho
2-octaprenylphenol hydroxylase (EC:1.14.13.-)
Putative ubiquinone biosynthesis protein UbiB n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WF36_9GAMM
scnpilot_p_inoc_scaffold_40_75
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(77096..77869)
DNA (774bp) protein (258aa)
sterol-binding protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034655B4
Sterol-binding protein {ECO:0000313|EMBL:GAN45081.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacte
hypothetical protein
scnpilot_p_inoc_scaffold_40_76
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

78183..78761
DNA (579bp) protein (193aa)
Membrane protein {ECO:0000313|EMBL:GAN45318.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sedi
Integral membrane protein id=2826597 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Aeromonas taxon_order=Aeromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
membrane protein
scnpilot_p_inoc_scaffold_40_77
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(78766..79230)
DNA (465bp) protein (155aa)
tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmL {ECO:0000256|HAMAP-R
tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NKP0_9GAMM
putative rRNA methylase SpoU family
scnpilot_p_inoc_scaffold_40_78
unknown

Not on your lists

comp(79339..79434)
DNA (96bp) protein (32aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_40_79

Not on your lists

comp(79617..80315)
DNA (699bp) protein (233aa)
Short-chain dehydrogenase/reductase SDR n=3 Tax=mine drainage metagenome RepID=T1AKP7_9ZZZZ
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EQD42590.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
short-chain dehydrogenase/reductase SDR
scnpilot_p_inoc_scaffold_40_80
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

80442..83282
DNA (2841bp) protein (947aa)
Zinc protease n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W778_9GAMM rbh
Zinc protease {ECO:0000313|EMBL:EIL95319.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphyll
putative Zn-dependent peptidase
scnpilot_p_inoc_scaffold_40_81
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

83519..84280
DNA (762bp) protein (254aa)
Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE {ECO:0000256|HAMAP-Rule:MF_01813}; EC=2.1.1.163 {ECO:0000256|HAMAP-Rule:MF_01813};; EC=2.1.1.201 {ECO:0000256|HAMAP-Rule:MF_01813};; 2-meth
Ubiquinone/menaquinone biosynthesis methyltransferase UbiE n=1 Tax=mine drainage metagenome RepID=T1AT59_9ZZZZ rbh
ubiquinone biosynthesis methyltransferase UbiE
scnpilot_p_inoc_scaffold_40_82
unknown

Not on your lists

84325..84561
DNA (237bp) protein (79aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_40_83
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

84612..85574
DNA (963bp) protein (321aa)
Proline iminopeptidase {ECO:0000256|RuleBase:RU003421}; EC=3.4.11.5 {ECO:0000256|RuleBase:RU003421};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonad
Proline iminopeptidase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VI94_9GAMM rbh
proline iminopeptidase
scnpilot_p_inoc_scaffold_40_84
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

85758..86399
DNA (642bp) protein (214aa)
Glutathione S-transferase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VI93_9GAMM rbh
Glutathione S-transferase {ECO:0000313|EMBL:EIL86934.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter
glutathione S-transferase
scnpilot_p_inoc_scaffold_40_85
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(86548..87231)
DNA (684bp) protein (228aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00031A20BD rbh
glutathione S-transferase
Glutathione S-transferase {ECO:0000313|EMBL:AIF46176.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;
scnpilot_p_inoc_scaffold_40_86
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

87363..89255
DNA (1893bp) protein (631aa)
Aminopeptidase N n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VR62_9GAMM rbh
Aminopeptidase {ECO:0000313|EMBL:KGI79102.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
aminopeptidase N
scnpilot_p_inoc_scaffold_40_87
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

89261..90247
DNA (987bp) protein (329aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034902CC
Alpha/beta hydrolase {ECO:0000313|EMBL:GAN45091.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter
alpha/beta hydrolase
scnpilot_p_inoc_scaffold_40_88
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(90284..91678)
DNA (1395bp) protein (465aa)
glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase (EC:2.3.1.157 2.7.7.23)
bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase n=1 Tax=Dyella japonica RepID=UPI0002D3065E
Bifunctional protein GlmU {ECO:0000256|HAMAP-Rule:MF_01631, ECO:0000256|SAAS:SAAS00083647}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Miz
scnpilot_p_inoc_scaffold_40_89
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(92666..93088)
DNA (423bp) protein (141aa)
F0F1 ATP synthase subunit epsilon n=1 Tax=Rudaea cellulosilytica RepID=UPI0003706FD6
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxI
ATP synthase subunit epsilon
scnpilot_p_inoc_scaffold_40_90
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(93275..94714)
DNA (1440bp) protein (480aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit bet
ATP synthase subunit beta n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VLT0_9GAMM rbh
ATP synthase, F1 beta subunit
Displaying items 61-90 of 299 in total

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