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scnpilot_p_inoc_scaffold_40

Search features with annotation key words

Displaying items 91-120 of 299 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_40_91
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(94906..95826)
DNA (921bp) protein (307aa)
F0F1 ATP synthase subunit gamma n=1 Tax=Dyella ginsengisoli RepID=UPI00034D60C7
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=1475
ATP synthase F1 subcomplex gamma subunit
scnpilot_p_inoc_scaffold_40_92
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(95833..97380)
DNA (1548bp) protein (516aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit a
ATP F0F1 synthase subunit alpha (EC:3.6.3.14)
F0F1 ATP synthase subunit alpha n=1 Tax=Dyella japonica RepID=UPI00031D5669
scnpilot_p_inoc_scaffold_40_93
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(97442..97975)
DNA (534bp) protein (178aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037047E4
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; T
ATP synthase F0F1 subunit delta
scnpilot_p_inoc_scaffold_40_94
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(98129..98599)
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035E7C70
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subuni
ATP synthase subunit B
scnpilot_p_inoc_scaffold_40_95
GWF2_Gammaproteobacteria_41_13_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(98656..98955)
DNA (300bp) protein (100aa)
ATP synthase subunit c; K02110 F-type H+-transporting ATPase subunit c [EC:3.6.3.14] Tax=GWF2_Gammaproteobacteria_41_13_curated
ATP synthase subunit c id=1919117 bin=GWE2_Gammaproteobacteria_42_36 species=Methylomonas methanica genus=Methylomonas taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE2_Gammaproteobacteria_42_36 organism_group=Gammaproteobacteria organism_desc=Small but looks good
ATP synthase subunit c
scnpilot_p_inoc_scaffold_40_96
Gammaproteobacteria bacterium MOLA455, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(99008..100006)
DNA (999bp) protein (333aa)
ATP synthase subunit a n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YV27_9GAMM
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:
atpB; ATP synthase subunit a
scnpilot_p_inoc_scaffold_40_97
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(100033..100401)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFM8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:GAN45042.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibact
membrane protein
scnpilot_p_inoc_scaffold_40_98
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(100729..102069)
DNA (1341bp) protein (447aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; X
tRNA modification GTPase MnmE n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WBW5_9GAMM
tRNA modification GTPase MnmE
scnpilot_p_inoc_scaffold_40_99
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(102087..103805)
DNA (1719bp) protein (573aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034ADCBF
Membrane protein insertase YidC {ECO:0000256|HAMAP-Rule:MF_01810, ECO:0000256|SAAS:SAAS00003942}; Foldase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane integrase YidC {ECO:0000256|HAMAP-Rule:MF_018
preprotein translocase subunit YidC
scnpilot_p_inoc_scaffold_40_100
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(103846..104220)
DNA (375bp) protein (125aa)
ribonuclease P n=1 Tax=Dyella ginsengisoli RepID=UPI0003490267
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rul
ribonuclease P
scnpilot_p_inoc_scaffold_40_101
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(104245..104379)
DNA (135bp) protein (45aa)
50S ribosomal protein L34 n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WBW2_9GAMM
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|SAAS:SAAS00020245}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Ole
50S ribosomal protein L34
scnpilot_p_inoc_scaffold_40_102
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

104609..105922
DNA (1314bp) protein (438aa)
chromosomal replication initiation protein n=1 Tax=Dyella japonica RepID=UPI0002F29C38
chromosomal replication initiator protein DnaA
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales;
scnpilot_p_inoc_scaffold_40_103
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

106130..107230
DNA (1101bp) protein (367aa)
DNA polymerase III subunit beta (EC:2.7.7.7)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1379159 species="Bacte
DNA polymerase III subunit beta n=1 Tax=Dyella ginsengisoli RepID=UPI00034CEE4E
scnpilot_p_inoc_scaffold_40_104
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

107274..108344
DNA (1071bp) protein (357aa)
DNA replication and repair protein RecF n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VUB2_9GAMM
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthom
DNA replication and repair protein RecF
scnpilot_p_inoc_scaffold_40_105
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

108417..110828
DNA (2412bp) protein (804aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1475481 species="Bacteria; P
DNA gyrase subunit B n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VL97_9GAMM rbh
gyrB; DNA gyrase subunit B
scnpilot_p_inoc_scaffold_40_106
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

110943..112322
DNA (1380bp) protein (460aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W979_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL96020.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
hypothetical protein
scnpilot_p_inoc_scaffold_40_107
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

112511..113167
DNA (657bp) protein (219aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036BA33B
Energy transducer TonB {ECO:0000313|EMBL:GAN45131.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacte
energy transducer TonB
scnpilot_p_inoc_scaffold_40_108
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

113252..114073
DNA (822bp) protein (274aa)
Biopolymer transporter ExbB {ECO:0000313|EMBL:GAN45132.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakii
Biopolymer transport ExbB protein id=2863044 bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas spadix genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
biopolymer transporter ExbB
scnpilot_p_inoc_scaffold_40_109
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

114086..114493
DNA (408bp) protein (136aa)
Biopolymer transport protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VL92_9GAMM
Biopolymer transporter ExbD {ECO:0000313|EMBL:GAN45133.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakii
biopolymer transporter ExbD
scnpilot_p_inoc_scaffold_40_110
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

114506..114946
DNA (441bp) protein (147aa)
Biopolymer transport ExbD1 protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VL93_9GAMM
Biopolymer transporter ExbD {ECO:0000313|EMBL:KJV36494.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter ye
biopolymer transporter ExbD
scnpilot_p_inoc_scaffold_40_111
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(115004..115759)
DNA (756bp) protein (252aa)
Pyridoxine 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088558}; Short=PNP synthase {ECO:0000256|HAMAP-Rule:MF_00279};; EC=2.6.99.2 {ECO:0000256|HAMAP-Rule:MF_00279,
Pyridoxine 5'-phosphate synthase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W887_9GAMM rbh
pyridoxamine 5'-phosphate oxidase
scnpilot_p_inoc_scaffold_40_112
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(115941..116612)
DNA (672bp) protein (224aa)
Phosphopantetheinyl transferase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W886_9GAMM
Phosphopantetheinyl transferase {ECO:0000313|EMBL:EIL95677.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodano
phosphopantetheinyl transferase
scnpilot_p_inoc_scaffold_40_113
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(116632..118587)
DNA (1956bp) protein (652aa)
Acetyl-coenzyme A synthetase {ECO:0000256|HAMAP-Rule:MF_01123}; Short=AcCoA synthetase {ECO:0000256|HAMAP-Rule:MF_01123};; Short=Acs {ECO:0000256|HAMAP-Rule:MF_01123};; EC=6.2.1.1 {ECO:0000256|HAMAP-R
acetyl-coenzyme A synthetase (EC:6.2.1.1)
Acetyl-CoA synthetase (Fragment) n=1 Tax=mine drainage metagenome RepID=T1BEW3_9ZZZZ
scnpilot_p_inoc_scaffold_40_114
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(118691..118948)
DNA (258bp) protein (86aa)
Uncharacterized protein {ECO:0000313|EMBL:GAN45142.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibact
scnpilot_p_inoc_scaffold_40_115
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

119019..119648
DNA (630bp) protein (210aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003717A80
membrane protein
Membrane protein {ECO:0000313|EMBL:AIF49547.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
scnpilot_p_inoc_scaffold_40_116
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

119777..120862
DNA (1086bp) protein (362aa)
radical SAM protein n=1 Tax=Dyella japonica RepID=UPI0002D8A4DF rbh
DNA repair photolyase
DNA repair photolyase {ECO:0000313|EMBL:AIF46343.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
scnpilot_p_inoc_scaffold_40_117
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(121122..123170)
DNA (2049bp) protein (683aa)
Dipeptidyl aminopeptidase/acylaminoacyl peptidase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WEB7_9GAMM rbh
Dipeptidyl aminopeptidase/acylaminoacyl peptidase {ECO:0000313|EMBL:EIL97808.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.
dipeptidyl aminopeptidase/acylaminoacyl peptidase
scnpilot_p_inoc_scaffold_40_118
unknown

Not on your lists

comp(123320..123586)
DNA (267bp) protein (89aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_40_119
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

124027..125124
DNA (1098bp) protein (366aa)
Undecaprenylphosphate N-acetylglucosamine 1-phosphate transferase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W073_9GAMM rbh
Undecaprenylphosphate N-acetylglucosamine 1-phosphate transferase {ECO:0000313|EMBL:EIL92864.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae
UDP-phosphate N-acetylglucosaminyl-1-phosphate transferase
scnpilot_p_inoc_scaffold_40_120
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(125152..126309)
DNA (1158bp) protein (386aa)
Group 1 glycosyl transferase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VN10_9GAMM
glycosyl transferase family 1
Group 1 glycosyl transferase {ECO:0000313|EMBL:EIL88601.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobac
Displaying items 91-120 of 299 in total

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