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scnpilot_p_inoc_scaffold_56

Search features with annotation key words

Displaying items 391-419 of 419 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_56_391
Burkholderiaceae bacterium 16, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(418504..419340)
DNA (837bp) protein (279aa)
Methyltransferase type 11 n=1 Tax=Burkholderia graminis C4D1M RepID=B1G3D7_9BURK rbh
SAM-dependent methlyltransferase {ECO:0000313|EMBL:KJK15592.1}; TaxID=1619952 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacte
methyltransferase type 11
scnpilot_p_inoc_scaffold_56_392
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(419515..420930)
DNA (1416bp) protein (472aa)
Putative amino acid decarboxylase, Pyridoxal-dependent protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AG77_9ACTN rbh
Amino acid decarboxylase {ECO:0000313|EMBL:KGQ20508.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdon
pyridoxal-dependent decarboxylase
scnpilot_p_inoc_scaffold_56_393
Pseudomonas sp. GM60, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(421093..421506)
DNA (414bp) protein (138aa)
MAPEG family n=1 Tax=Pseudomonas sp. GM60 RepID=J3GWS6_9PSED
MAPEG family {ECO:0000313|EMBL:EJM77437.1}; Flags: Precursor;; TaxID=1144334 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomon
hypothetical protein
scnpilot_p_inoc_scaffold_56_394
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(421654..422595)
DNA (942bp) protein (314aa)
hypothetical protein n=1 Tax=Burkholderia sp. JPY251 RepID=UPI00037700A3 rbh
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
hypothetical protein
scnpilot_p_inoc_scaffold_56_395
Burkholderia sp. CCGE1002, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

422758..423735
DNA (978bp) protein (326aa)
AraC family transcriptional regulator n=1 Tax=Burkholderia sp. JPY251 RepID=UPI00037EC6B5 rbh
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ADG19849.1}; TaxID=640511 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Bur
scnpilot_p_inoc_scaffold_56_396
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

423990..425075
DNA (1086bp) protein (362aa)
Diguanylate cyclase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VWU1_9GAMM rbh
Diguanylate cyclase {ECO:0000313|EMBL:EIL91682.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvu
GGDEF: diguanylate cyclase (GGDEF) domain
scnpilot_p_inoc_scaffold_56_397
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(425214..425423)
DNA (210bp) protein (70aa)
Major cold shock protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WHR4_9GAMM
Major cold shock protein {ECO:0000313|EMBL:EIL99005.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter
cold shock domain-contain protein
scnpilot_p_inoc_scaffold_56_398
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(425651..427702)
DNA (2052bp) protein (684aa)
Phosphoesterase n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) PF1_STIAD">RepID=Q08PF1_STIAD rbh
phosphoesterase
Phosphoesterase {ECO:0000313|EMBL:EAU62358.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmatella
scnpilot_p_inoc_scaffold_56_399
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

428152..428859
DNA (708bp) protein (236aa)
Phosphoglycerate mutase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3L5_9GAMM
Phosphoglycerate mutase {ECO:0000313|EMBL:EIL94056.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
hypothetical protein
scnpilot_p_inoc_scaffold_56_400
Salinisphaera shabanensis, Salinisphaera, Salinisphaerales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(428897..429886)
DNA (990bp) protein (330aa)
DNA polymerase III subunit alpha protein {ECO:0000313|EMBL:ERJ20460.1}; EC=2.7.7.7 {ECO:0000313|EMBL:ERJ20460.1};; TaxID=1033802 species="Bacteria; Proteobacteria; Gammaproteobacteria; Salinisphaerale
DNA polymerase III subunit alpha protein n=1 Tax=Salinisphaera shabanensis E1L3A RepID=U2ERW1_9GAMM rbh
integral membrane protein TerC
scnpilot_p_inoc_scaffold_56_401
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(429958..431319)
DNA (1362bp) protein (454aa)
dipeptidase; K01273 membrane dipeptidase [EC:3.4.13.19] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036EFB7B rbh
dipeptidase
scnpilot_p_inoc_scaffold_56_402
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(431348..433354)
DNA (2007bp) protein (669aa)
Dipeptidyl aminopeptidase/acylaminoacyl peptidase n=1 Tax=Rhodanobacter denitrificans RepID=I4WYZ3_9GAMM rbh
Dipeptidyl aminopeptidase/acylaminoacyl peptidase {ECO:0000313|EMBL:EIL92600.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.
prolyl oligopeptidase
scnpilot_p_inoc_scaffold_56_403
Chromohalobacter salexigens, Chromohalobacter, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(433571..434770)
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) RepID=Q1R1F1_CHRSD rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE57457.1}; TaxID=290398 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Chromohalobacter.;" source="Chromohalobac
scnpilot_p_inoc_scaffold_56_404
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

434948..435847
DNA (900bp) protein (300aa)
DNA ligase (EC:6.5.1.1)
DNA ligase ATP-dependent protein n=1 Tax=Salinisphaera shabanensis E1L3A RepID=U2G1Q5_9GAMM rbh
DNA ligase {ECO:0000313|EMBL:KGI79020.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
scnpilot_p_inoc_scaffold_56_405
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(435880..436317)
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00037EBEB0
Thioredoxin {ECO:0000313|EMBL:KGI78083.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
thioredoxin
scnpilot_p_inoc_scaffold_56_406

Not on your lists

436537..437445
DNA (909bp) protein (303aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034BDA7F
Uncharacterized protein {ECO:0000313|EMBL:KKN99219.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ABC transporter ATP-binding protein
scnpilot_p_inoc_scaffold_56_407
R_Gammaproteobacteria_57_10, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

437432..438967
DNA (1536bp) protein (512aa)
hypothetical protein n=1 Tax=Maricaulis sp. JL2009 RepID=UPI0003AABB2B
hypothetical protein; K01992 ABC-2 type transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_57_10_curated
hypothetical protein
scnpilot_p_inoc_scaffold_56_408
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(438960..439973)
DNA (1014bp) protein (338aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002F8FDB6 rbh
flagellar motor protein MotB
Flagellar motor protein MotB {ECO:0000313|EMBL:AHX12341.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangninge
scnpilot_p_inoc_scaffold_56_409
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(439970..440839)
DNA (870bp) protein (290aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00031A2310 rbh
flagellar motor protein MotA
Flagellar motor protein MotA {ECO:0000313|EMBL:AHX12342.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangninge
scnpilot_p_inoc_scaffold_56_410
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(440940..441704)
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WVG0_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIM03452.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
hypothetical protein
scnpilot_p_inoc_scaffold_56_411
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(441944..443059)
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NPH8_9GAMM rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89551.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter de
scnpilot_p_inoc_scaffold_56_412
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(443253..443921)
DNA (669bp) protein (223aa)
Putative dithiol-disulfide isomerase involved in polyketide biosynthesis n=1 Tax=Rhodanobacter denitrificans RepID=M4NLP4_9GAMM
putative dithiol-disulfide isomerase involved in polyketide biosynthesis
Putative dithiol-disulfide isomerase involved in polyketide biosynthesis {ECO:0000313|EMBL:AGG90578.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomo
scnpilot_p_inoc_scaffold_56_413
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(444047..445603)
DNA (1557bp) protein (519aa)
Amidohydrolase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INJ3_KORVE rbh
Putative hydrolase {ECO:0000313|EMBL:GAO38741.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changb
amidohydrolase
scnpilot_p_inoc_scaffold_56_414
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

445829..446746
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WWZ2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM03984.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
putative deacylase
scnpilot_p_inoc_scaffold_56_415
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

446961..447422
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00031C6F28
membrane protein
Membrane protein {ECO:0000313|EMBL:AHX12744.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
scnpilot_p_inoc_scaffold_56_416
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

448061..448843
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VWB2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL91503.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
pyrroloquinoline quinone (coenzyme PQQ) biosynthesis protein C
scnpilot_p_inoc_scaffold_56_417
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

448971..451664
DNA (2694bp) protein (898aa)
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VME6_9GAMM rbh
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EIL88387.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonad
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein
scnpilot_p_inoc_scaffold_56_418
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

451824..452426
DNA (603bp) protein (201aa)
Cation transport regulator protein n=1 Tax=Herbaspirillum sp. GW103 RepID=I3CPM5_9BURK
Gamma-glutamyl cyclotransferase {ECO:0000313|EMBL:KGI77498.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagr
chaC; cation transport regulator protein
scnpilot_p_inoc_scaffold_56_419
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(452443..452661)
DNA (219bp) protein (73aa)
amino acid ABC transporter permease n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI000370D3C6
ABC transporter amino acid permease
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
Displaying items 391-419 of 419 in total

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