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scnpilot_p_inoc_scaffold_56_92

Organism: SCNpilot_P_inoc_Xanthomonadales_65_14

near complete RP 52 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: comp(98515..99099)

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=267608 species="Ba similarity UNIPROT
DB: UniProtKB
  • Identity: 37.2
  • Coverage: 188.0
  • Bit_score: 102
  • Evalue 5.00e-19
Probable 2h phosphoesterase (2'-5' rna ligase) protein n=1 Tax=Ralstonia solanacearum (strain GMI1000) RepID=Q8XWV6_RALSO similarity UNIREF
DB: UNIREF100
  • Identity: 35.3
  • Coverage: 207.0
  • Bit_score: 103
  • Evalue 2.70e-19
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 37.2
  • Coverage: 188.0
  • Bit_score: 102
  • Evalue 1.00e-19

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Taxonomy

Ralstonia solanacearum → Ralstonia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 585
GTGACGCCCACGCCGGCCAGCGGCGATCCCGGCAGCCCGCGCTGCTTCCTTGCACTGCTTCCCGATGCCGCCAGCCGCGACGCCCTGCAACGTTGCCGCGAAGTGGCCGCGACTTCGCCGGCCAGCGCGCGCGGCACGCGCTGGGTCGAAGCCGCGGCGCTGCACCTGACCCTGCGTTTCTTCGGGGCGGCCACGAGTGCGCAGGTCGAATACCTCAAGCACATGCTGCCGACGCTGGCGCGCGGCTTGCCGGCACTCTCCGCACGACGTTGCGCGATCTGGCCGAACCGCGCGCGACCGCGGCTGGTGGTGCTGGAGTTCGACCCGCCGGATGCGCTGCTCGCACTCGCGGGGGAATGCGAAACGCTCGCGCAAAAAGCCGGATTCGAGGCGGAGTCGCGTGCCTTCAAGGCGCACCTGACGCTGGCGCGCCTGCGCCCGGGCTGCCTGCCGGAAATTCCACCCGCACCGGCTGCATCGCTCGCCTTCGAATCGCTGGCGCTGATGGTGAGCGACTTGCGCAGCGGCGGCGCAAGCTATCGCAGCCTGGCGAGCGTCGCGTTGCCGGTGCCCGCAAAAACCTGA
PROTEIN sequence
Length: 195
VTPTPASGDPGSPRCFLALLPDAASRDALQRCREVAATSPASARGTRWVEAAALHLTLRFFGAATSAQVEYLKHMLPTLARGLPALSARRCAIWPNRARPRLVVLEFDPPDALLALAGECETLAQKAGFEAESRAFKAHLTLARLRPGCLPEIPPAPAASLAFESLALMVSDLRSGGASYRSLASVALPVPAKT*