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scnpilot_p_inoc_scaffold_56_94

Organism: SCNpilot_P_inoc_Xanthomonadales_65_14

near complete RP 52 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: 99906..100439

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5L3_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 62.6
  • Coverage: 179.0
  • Bit_score: 208
  • Evalue 5.50e-51
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 63.1
  • Coverage: 179.0
  • Bit_score: 208
  • Evalue 2.00e-51
RNA polymerase sigma factor, sigma-70 family Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 64.2
  • Coverage: 179.0
  • Bit_score: 208
  • Evalue 5.90e-51

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Taxonomy

RIFOXYA1_FULL_Rhodanobacter_67_6_curated → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 534
ATGCGTGATCGGGAACGACAGCAGCGATTCGAGGGCTTGCTGCGCGAGCACCAGCGGATCGTGTTCAAGGTTGCGCGTGTGTACGCGCGGGACCTGCACGAACGCGACGACCTGGCGCAGGAAATCGCCGCGCAGCTGTGGCGTTCCTTCGGCGCGTTCGACGAACGCCGCGCCAGGTTCTCGACCTGGATGTATCGGGTGGCGTTGAACGTCGCGATCTCGTATGCGCGCAGTGCAAATCGTTCCCTGGCTCCCCATCTCGAACCCCTCGACGGCGCGCATCTCGAAAGCGTTGCAGGCCCCGATACATCGCATGACGAATCGTTGGAACGCGGCGAACGCGTGGCTGTGCTGAACGCTTTCATCGGCAGCCTGGATGCACTCAATCGCGCGCTCGTGCTGCTGTACCTCGAAGACCGCGCCTACGTCGAGATCGCTGCGGTGCTCGGCATCAGCGAAACCAATGTCGCGACCAAACTCAACCGCATCAAACAAAAACTGCGCGCACAAGCCGGCGCACTCACGGGAGCATGA
PROTEIN sequence
Length: 178
MRDRERQQRFEGLLREHQRIVFKVARVYARDLHERDDLAQEIAAQLWRSFGAFDERRARFSTWMYRVALNVAISYARSANRSLAPHLEPLDGAHLESVAGPDTSHDESLERGERVAVLNAFIGSLDALNRALVLLYLEDRAYVEIAAVLGISETNVATKLNRIKQKLRAQAGALTGA*