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scnpilot_p_inoc_scaffold_56_262

Organism: SCNpilot_P_inoc_Xanthomonadales_65_14

near complete RP 52 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: comp(289798..290013)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3X1R9_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 59.7
  • Coverage: 67.0
  • Bit_score: 82
  • Evalue 1.40e-13
Putative Xre family DNA-binding protein {ECO:0000313|EMBL:GAM00889.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source similarity UNIPROT
DB: UniProtKB
  • Identity: 59.7
  • Coverage: 67.0
  • Bit_score: 83
  • Evalue 1.50e-13
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 55.2
  • Coverage: 67.0
  • Bit_score: 71
  • Evalue 9.00e-11

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Taxonomy

Sphingomonas parapaucimobilis → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 216
TTGACTGAGAGCCTGCACAACCGCGTGCGCGAGGTGCGTGAAGCCAGGGGCTGGACGCAGCTGCATCTGGCGGAGGTGATGGGCGTGAGCCGCAAGACGGTCAATACCATCGAAAACGGCGCGCTCAATCCGTCCACCTTCATTGCGTTGAAGCTGACACGCGCACTCGATGAGCCGGTCGAACGATTGTTCTGGCTCGCTCCACAGGAACCCTGA
PROTEIN sequence
Length: 72
LTESLHNRVREVREARGWTQLHLAEVMGVSRKTVNTIENGALNPSTFIALKLTRALDEPVERLFWLAPQEP*