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scnpilot_p_inoc_scaffold_56

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Displaying items 241-270 of 419 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_56_241
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(260206..260841)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WH06_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL98747.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
hypothetical protein
scnpilot_p_inoc_scaffold_56_242
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

comp(260841..261851)
DNA (1011bp) protein (337aa)
Putative threonine dehydratase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I9C5_CALAS rbh
putative threonine dehydratase
Putative threonine dehydratase {ECO:0000313|EMBL:BAM01863.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strai
scnpilot_p_inoc_scaffold_56_243
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(261868..262074)
DNA (207bp) protein (69aa)
hypothetical protein n=1 Tax=Methylovulum miyakonense RepID=UPI0003818750
amino acid transporter
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_p_inoc_scaffold_56_244
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(262082..263518)
DNA (1437bp) protein (479aa)
Exoribonuclease R n=1 Tax=Rhodanobacter denitrificans RepID=M4NJL6_9GAMM rbh
exoribonuclease R Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
exoribonuclease R
scnpilot_p_inoc_scaffold_56_245
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(263546..265099)
DNA (1554bp) protein (518aa)
beta-lactamase family protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Beta-lactamase family protein id=4605543 bin=GWC2_Ignavibacteria_56_12 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
beta-lactamase
scnpilot_p_inoc_scaffold_56_246
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(265287..266966)
DNA (1680bp) protein (560aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6D0_9GAMM
Enterochelin esterase {ECO:0000313|EMBL:KGI77650.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas sol
enterochelin esterase-like enzyme
scnpilot_p_inoc_scaffold_56_247
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(267040..269046)
DNA (2007bp) protein (669aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYJ7_9GAMM rbh
Peptidase M1 {ECO:0000313|EMBL:KGI77649.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
aminopeptidase N
scnpilot_p_inoc_scaffold_56_248
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(269511..271973)
DNA (2463bp) protein (821aa)
Phosphoenolpyruvate synthase {ECO:0000256|PIRNR:PIRNR000854}; Short=PEP synthase {ECO:0000256|PIRNR:PIRNR000854};; EC=2.7.9.2 {ECO:0000256|PIRNR:PIRNR000854};; Pyruvate, water dikinase {ECO:0000256|PI
phosphoenolpyruvate synthase (EC:2.7.9.2)
Phosphoenolpyruvate synthase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6P1_9GAMM rbh
scnpilot_p_inoc_scaffold_56_249
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

272095..272922
DNA (828bp) protein (276aa)
PEP synthetase regulatory protein n=1 Tax=Dyella japonica RepID=UPI0002E47621
PEP synthetase regulatory protein
Putative phosphoenolpyruvate synthase regulatory protein {ECO:0000256|HAMAP-Rule:MF_01062, ECO:0000256|SAAS:SAAS00213394}; Short=PEP synthase regulatory protein {ECO:0000256|HAMAP-Rule:MF_01062};; Sho
scnpilot_p_inoc_scaffold_56_250
Gluconacetobacter diazotrophicus, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

273325..277884
DNA (4560bp) protein (1520aa)
Outer membrane autotransporter barrel domain protein n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=B5ZHX8_GLUDA
outer membrane autotransporter barrel domain-containing protein
Outer membrane autotransporter barrel domain protein {ECO:0000313|EMBL:ACI52606.1}; Flags: Precursor;; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacte
scnpilot_p_inoc_scaffold_56_251
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(277920..278642)
DNA (723bp) protein (241aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197
Uridylate kinase n=1 Tax=Rhodanobacter denitrificans RepID=I4WNP7_9GAMM rbh
uridylate kinase
scnpilot_p_inoc_scaffold_56_252
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(278853..279728)
DNA (876bp) protein (292aa)
Elongation factor Ts n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WRM7_PSEUU
translation elongation factor Ts
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
scnpilot_p_inoc_scaffold_56_253
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(280087..280932)
DNA (846bp) protein (282aa)
30S ribosomal protein S2 n=1 Tax=Dyella ginsengisoli RepID=UPI00034BC6AD
30S ribosomal protein S2 {ECO:0000313|EMBL:GAN45943.1}; Flags: Fragment;; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" so
30S ribosomal protein S2
scnpilot_p_inoc_scaffold_56_254
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

281240..282004
DNA (765bp) protein (255aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974
Map n=1 Tax=Dyella japonica RepID=UPI00030A4D86 rbh
Map
scnpilot_p_inoc_scaffold_56_255
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

282149..284845
DNA (2697bp) protein (899aa)
uridylyltransferase n=1 Tax=Dyella ginsengisoli RepID=UPI000348446B
Bifunctional uridylyltransferase/uridylyl-removing enzyme {ECO:0000256|HAMAP-Rule:MF_00277, ECO:0000256|SAAS:SAAS00228994}; Short=UTase/UR {ECO:0000256|HAMAP-Rule:MF_00277};; Bifunctional [protein-PII
uridylyltransferase
scnpilot_p_inoc_scaffold_56_256
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

284947..285897
DNA (951bp) protein (317aa)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00811, ECO:0000256|SAAS:SAAS00013419}; EC=2.3.1.117 {ECO:0000256|HAMAP-Rule:MF_00811, ECO:0000256|SAAS:SAA
dapD; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase (EC:2.3.1.117)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3H1_9GAMM
scnpilot_p_inoc_scaffold_56_257
Chlorobaculum parvum, Chlorobaculum, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

285952..286404
DNA (453bp) protein (151aa)
Putative uncharacterized protein n=1 Tax=Chlorobaculum parvum (strain NCIB 8327) RepID=B3QMY3_CHLP8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACF11286.1}; Flags: Precursor;; TaxID=517417 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobaculum.;" source="Chlorobaculum parvu
scnpilot_p_inoc_scaffold_56_258
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

286401..286754
DNA (354bp) protein (118aa)
Spx/MgsR family transcriptional regulator n=1 Tax=Rhodanobacter sp. 115 RepID=I4VIH0_9GAMM
Spx/MgsR family transcriptional regulator {ECO:0000313|EMBL:EIL87011.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sourc
arsenate reductase
scnpilot_p_inoc_scaffold_56_259
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

286762..287823
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VIH2_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL87013.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
hypothetical protein
scnpilot_p_inoc_scaffold_56_260
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

287873..289009
DNA (1137bp) protein (379aa)
Succinyl-diaminopimelate desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690, ECO:0000256|SAAS:SAAS00082787}; Short=SDAP desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690};; EC=3.5.1.18 {ECO:0000256|HAMAP-Rul
Succinyl-diaminopimelate desuccinylase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3H5_9GAMM rbh
succinyl-diaminopimelate desuccinylase
scnpilot_p_inoc_scaffold_56_261
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(289015..289575)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4Q9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94450.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
Peroxiredoxin
scnpilot_p_inoc_scaffold_56_262
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(289798..290013)
DNA (216bp) protein (72aa)
Helix-turn-helix family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3X1R9_9SPHN
Putative Xre family DNA-binding protein {ECO:0000313|EMBL:GAM00889.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source
transcriptional regulator
scnpilot_p_inoc_scaffold_56_263
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(290006..290437)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0SZF2_CAUSK
Uncharacterized protein {ECO:0000313|EMBL:KJV37290.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojue
hypothetical protein
scnpilot_p_inoc_scaffold_56_264
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(290606..290821)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3J6_9GAMM
putative periplasmic protein Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
putative periplasmic protein
scnpilot_p_inoc_scaffold_56_265
Bradyrhizobium sp. STM 3809, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(290832..291377)
DNA (546bp) protein (182aa)
Putative cytochrome b561 n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0STC2_9BRAD
Putative cytochrome b561 {ECO:0000313|EMBL:CCD97449.1}; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp
cytochrome B561
scnpilot_p_inoc_scaffold_56_266
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(291455..292276)
DNA (822bp) protein (274aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002FC9193
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHX14189.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.
scnpilot_p_inoc_scaffold_56_267
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(292328..294784)
DNA (2457bp) protein (819aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034B93DE rbh
peptidase S45
Peptidase S45 {ECO:0000313|EMBL:AHX14190.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
scnpilot_p_inoc_scaffold_56_268
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(294960..295736)
DNA (777bp) protein (259aa)
Lipoate--protein ligase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VZA9_9GAMM rbh
Lipoate--protein ligase {ECO:0000313|EMBL:EIL92550.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter f
lipoate-protein ligase A
scnpilot_p_inoc_scaffold_56_269
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(295733..296017)
DNA (285bp) protein (95aa)
Biotin/lipoate A/B protein ligase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VZA8_9GAMM
Biotin/lipoate A/B protein ligase {ECO:0000313|EMBL:EIL92549.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhoda
hypothetical protein
scnpilot_p_inoc_scaffold_56_270
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(296094..296552)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WYS6_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89838.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sourc
Displaying items 241-270 of 419 in total

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