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scnpilot_p_inoc_scaffold_56

Search features with annotation key words

Displaying items 211-240 of 419 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_56_211
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

226371..228638
DNA (2268bp) protein (756aa)
Glycoside hydrolase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WAQ0_9GAMM rbh
Glycoside hydrolase {ECO:0000313|EMBL:EIL96541.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thioo
glycoside hydrolase family 65
scnpilot_p_inoc_scaffold_56_212
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

228669..229745
DNA (1077bp) protein (359aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034A4777 rbh
Alpha/beta hydrolase {ECO:0000313|EMBL:KGI77037.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli
alpha/beta hydrolase
scnpilot_p_inoc_scaffold_56_213
Brevundimonas abyssalis, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

229803..231620
DNA (1818bp) protein (606aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003771740 rbh
TPR domain protein {ECO:0000313|EMBL:GAD58948.1}; TaxID=1391729 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas abyssa
hypothetical protein
scnpilot_p_inoc_scaffold_56_214
Synechococcus phage S-SKS1, Caudovirales, Viruses

Not on your lists

comp(231642..232238)
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000364A62B rbh
Uncharacterized protein {ECO:0000313|EMBL:AGH31515.1}; TaxID=754042 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae.;" source="Synechococcus phage S-SKS1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_56_215
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(232322..234472)
DNA (2151bp) protein (717aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036C1F14 rbh
glycoside hydrolase clan GH-D Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
glycoside hydrolase clan GH-D
scnpilot_p_inoc_scaffold_56_216
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

234665..235366
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WAS2_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL96563.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
hypothetical protein
scnpilot_p_inoc_scaffold_56_217
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(235350..236531)
DNA (1182bp) protein (394aa)
metallophosphoesterase n=1 Tax=Pseudomonas fragi RepID=UPI0002883E52 rbh
putative membrane-attached phosphoesterase
Putative membrane-attached phosphoesterase {ECO:0000313|EMBL:CDM25227.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source
scnpilot_p_inoc_scaffold_56_218
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(236539..237951)
DNA (1413bp) protein (471aa)
D-2-hydroxyglutarate dehydrogenase (EC:1.1.99.2)
D-2-hydroxyglutarate dehydrogenase {ECO:0000313|EMBL:CDM25708.1}; EC=1.1.99.2 {ECO:0000313|EMBL:CDM25708.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alca
Oxidoreductase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VUR3_9GAMM rbh
scnpilot_p_inoc_scaffold_56_219
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(238011..238901)
DNA (891bp) protein (297aa)
LysR family transcriptional regulator n=1 Tax=Rhodanobacter sp. 115 RepID=I4WVF3_9GAMM rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:EIM03445.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="R
trpI; LysR family transcriptional regulator
scnpilot_p_inoc_scaffold_56_220
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

239012..240223
DNA (1212bp) protein (404aa)
tryptophan synthase, beta chain (EC:4.2.1.20)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales;
Tryptophan synthase beta chain n=2 Tax=Rhodanobacter denitrificans RepID=M4NCT4_9GAMM
scnpilot_p_inoc_scaffold_56_221
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

240360..241181
DNA (822bp) protein (274aa)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00031177}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00108586};; TaxID=1543381 species="
tryptophan synthase, alpha chain (EC:4.2.1.20)
Tryptophan synthase alpha chain n=1 Tax=Rhodanobacter denitrificans RepID=M4NLA4_9GAMM
scnpilot_p_inoc_scaffold_56_222
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

241387..241932
DNA (546bp) protein (182aa)
Cytochrome c oxidase subunit II n=1 Tax=Rhodanobacter denitrificans RepID=I4WWW6_9GAMM
heme/copper-type cytochrome/quinol oxidase, subunit 2
Heme/copper-type cytochrome/quinol oxidase, subunit 2 {ECO:0000313|EMBL:AGG89571.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomona
scnpilot_p_inoc_scaffold_56_223
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

241935..243434
DNA (1500bp) protein (500aa)
Cytochrome c oxidase subunit I n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDA3_9GAMM rbh
Cytochrome c oxidase subunit I {ECO:0000313|EMBL:EIL97444.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanob
heme/copper-type cytochrome/quinol oxidase, subunit 1
scnpilot_p_inoc_scaffold_56_224
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

243406..244023
DNA (618bp) protein (206aa)
Electron transport protein SCO1/SenC n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDA4_9GAMM
Electron transport protein SCO1/SenC {ECO:0000313|EMBL:EIL97445.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rh
uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems
scnpilot_p_inoc_scaffold_56_225
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

244020..244613
DNA (594bp) protein (198aa)
Transmembrane protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WWW9_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89574.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sourc
scnpilot_p_inoc_scaffold_56_226
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

244688..245551
DNA (864bp) protein (288aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VK31_9GAMM
acetyl-CoA carboxyl transferase
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395}; Short=ACCase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; Short=Acetyl-CoA carboxylase carboxyltr
scnpilot_p_inoc_scaffold_56_227
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

246263..247600
DNA (1338bp) protein (446aa)
Folylpolyglutamate synthase/dihydrofolate synthase n=1 Tax=Rhodanobacter denitrificans RepID=M4NCY0_9GAMM rbh
folylpolyglutamate synthase/dihydrofolate synthase
Folylpolyglutamate synthase/dihydrofolate synthase {ECO:0000313|EMBL:AGG88565.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.
scnpilot_p_inoc_scaffold_56_228
Frateuria aurantia, Frateuria, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

247689..248696
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8L477_FRAAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFC86553.1}; TaxID=767434 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Frateuria.;" source="Frateuria aurantia (
scnpilot_p_inoc_scaffold_56_229
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

248887..249528
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6E9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:GAN45903.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibact
colicin V production protein
scnpilot_p_inoc_scaffold_56_230
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

249753..251228
DNA (1476bp) protein (492aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256
amidophosphoribosyltransferase n=1 Tax=Dyella japonica RepID=UPI0002FFCEEF rbh
amidophosphoribosyltransferase
scnpilot_p_inoc_scaffold_56_231
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

251360..252463
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WU58_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIM03000.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter t
hypothetical protein
scnpilot_p_inoc_scaffold_56_232
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

252460..253269
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8E8_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:KGI77881.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas s
hypothetical protein
scnpilot_p_inoc_scaffold_56_233
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(253291..253806)
DNA (516bp) protein (172aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4Y6_GEMAT
hypothetical membrane protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical membrane protein
scnpilot_p_inoc_scaffold_56_234
Candidatus Accumulibacter sp. SK-01, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(253842..254342)
DNA (501bp) protein (167aa)
Putative cytochrome c n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4R4R3_9RHIZ
Cytochrome c, mono-and diheme variant {ECO:0000313|EMBL:KFB65986.1}; Flags: Precursor;; TaxID=1457154 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candid
cytochrome C
scnpilot_p_inoc_scaffold_56_235
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

254468..255772
DNA (1305bp) protein (435aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003776B15 rbh
Amidohydrolase {ECO:0000313|EMBL:KJV36447.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
amidohydrolase
scnpilot_p_inoc_scaffold_56_236
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(255787..256728)
DNA (942bp) protein (314aa)
hypothetical protein n=1 Tax=Sphingomonas wittichii RepID=UPI00036422AA
Uncharacterized protein {ECO:0000313|EMBL:ETR77871.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
leucyl-tRNA synthetase
scnpilot_p_inoc_scaffold_56_237
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(256790..257830)
DNA (1041bp) protein (347aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI0003818ED2
Uncharacterized protein {ECO:0000313|EMBL:KEQ29353.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antar
putative secreted protein
scnpilot_p_inoc_scaffold_56_238
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

257964..258776
DNA (813bp) protein (271aa)
DoxX family protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q029Z9_SOLUE
DoxX family protein
DoxX family protein {ECO:0000313|EMBL:ABJ82127.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Sol
scnpilot_p_inoc_scaffold_56_239
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

258718..259578
DNA (861bp) protein (287aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002E8C5DC
DoxX family protein {ECO:0000313|EMBL:AHX15437.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
DoxX family protein
scnpilot_p_inoc_scaffold_56_240
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(259609..260025)
DNA (417bp) protein (139aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Comamonas testosteroni KF-1 RepID=B7X4Z2_COMTE
glyoxalase
Glyoxalase {ECO:0000313|EMBL:AIJ45624.1}; TaxID=1392005 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni TK102.;"
Displaying items 211-240 of 419 in total

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