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scnpilot_p_inoc_scaffold_56

Search features with annotation key words

Displaying items 181-210 of 419 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_56_181

Not on your lists

comp(190545..191717)
DNA (1173bp) protein (391aa)
Uncharacterized protein n=1 Tax=Formosa sp. AK20 RepID=M7MFH2_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KKM00017.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
scnpilot_p_inoc_scaffold_56_182

Not on your lists

comp(191761..194538)
DNA (2778bp) protein (926aa)
Methylase n=1 Tax=mine drainage metagenome RepID=E6PW57_9ZZZZ rbh
Methylase {ECO:0000313|EMBL:CBH99164.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
scnpilot_p_inoc_scaffold_56_183
Alteromonas australica, Alteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

194843..195538
DNA (696bp) protein (232aa)
Putative uncharacterized protein n=1 Tax=Arcobacter nitrofigilis (strain ATCC 33309 / DSM 7299 / LMG 7604 / NCTC 12251 / CI) RepID=D5V3T4_ARCNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF98278.1}; TaxID=589873 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alteromonas.;" source="Alteromonas austra
scnpilot_p_inoc_scaffold_56_184
Burkholderia ambifaria, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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195525..196430
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Burkholderia ambifaria (strain MC40-6) RepID=B1Z6M9_BURA4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB69106.1}; TaxID=398577 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex
scnpilot_p_inoc_scaffold_56_185
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(196461..197675)
DNA (1215bp) protein (405aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003629518
plasmid recombinase
Putative plasmid recombinase {ECO:0000313|EMBL:CAH37270.1}; TaxID=272560 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" s
scnpilot_p_inoc_scaffold_56_186

Not on your lists

197955..199877
DNA (1923bp) protein (641aa)
Peptidyl-prolyl cis-trans isomerase D n=2 Tax=mine drainage metagenome RepID=T0YZK5_9ZZZZ rbh
Peptidyl-prolyl cis-trans isomerase D {ECO:0000313|EMBL:EQD41111.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
peptidylprolyl isomerase
scnpilot_p_inoc_scaffold_56_187

Not on your lists

comp(199947..200735)
DNA (789bp) protein (263aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=mine drainage metagenome RepID=T0Z9H4_9ZZZZ rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EQD41683.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
enoyl-(acyl carrier protein) reductase
scnpilot_p_inoc_scaffold_56_188
Frateuria aurantia, Frateuria, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(200791..202035)
DNA (1245bp) protein (415aa)
LysM repeat-containing protein n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8L6P4_FRAAD
LysM repeat-containing protein
LysM repeat-containing protein {ECO:0000313|EMBL:AFC86860.1}; Flags: Precursor;; TaxID=767434 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Frateuria.;" so
scnpilot_p_inoc_scaffold_56_189
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(202032..202811)
DNA (780bp) protein (260aa)
Hydroxyacylglutathione hydrolase {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352}; EC=3.1.2.6 {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352};; Glyoxalase II {ECO:0000
Hydroxyacylglutathione hydrolase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VN66_9GAMM
hydroxyacylglutathione hydrolase
scnpilot_p_inoc_scaffold_56_190
unknown

Not on your lists

202974..203624
DNA (651bp) protein (217aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_56_191
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

203621..204073
DNA (453bp) protein (151aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00
RNase H n=1 Tax=Dyella japonica RepID=UPI0002EFCE87
ribonuclease H
scnpilot_p_inoc_scaffold_56_192
Frateuria aurantia, Frateuria, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

204070..204795
DNA (726bp) protein (242aa)
DNA polymerase III, epsilon subunit n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8L6P0_FRAAD
DNA polymerase III subunit epsilon
DNA polymerase III, epsilon subunit {ECO:0000313|EMBL:AFC86856.1}; TaxID=767434 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Frateuria.;" source="Frateuri
scnpilot_p_inoc_scaffold_56_193
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(204830..205522)
DNA (693bp) protein (231aa)
protein phosphatase n=1 Tax=Xanthomonadaceae RepID=UPI00029A2262
protein serine/threonine phosphatase
Protein serine/threonine phosphatase {ECO:0000313|EMBL:ACF50551.1}; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotroph
scnpilot_p_inoc_scaffold_56_194
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(205584..206036)
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002D84209
Uncharacterized protein {ECO:0000313|EMBL:KJV37158.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojue
hypothetical protein
scnpilot_p_inoc_scaffold_56_195
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(206173..207006)
DNA (834bp) protein (278aa)
Phosphatidylserine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00662, ECO:0000256|SAAS:SAAS00154492}; EC=4.1.1.65 {ECO:0000256|HAMAP-Rule:MF_00662, ECO:0000256|SAAS:SAAS00093350};; TaxID=154338
phosphatidylserine decarboxylase n=1 Tax=Dyella ginsengisoli RepID=UPI000346B2E8
phosphatidylserine decarboxylase
scnpilot_p_inoc_scaffold_56_196
uncultured Thiohalocapsa sp. PB-PSB1, Thiohalocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

207061..208128
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4IG89_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:ESQ08912.1}; TaxID=1385625 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiohalocapsa; environmental samples.;" source
protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific
scnpilot_p_inoc_scaffold_56_197
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

208130..208654
DNA (525bp) protein (175aa)
Acetyltransferase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VM05_9GAMM
Acetyltransferase {ECO:0000313|EMBL:EIL88246.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115
acetyltransferase, ribosomal protein N-acetylase
scnpilot_p_inoc_scaffold_56_198
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

208688..209791
DNA (1104bp) protein (368aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU0
chorismate synthase (EC:4.2.3.5)
Chorismate synthase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRD3_9GAMM
scnpilot_p_inoc_scaffold_56_199
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

209872..210900
DNA (1029bp) protein (343aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:000
semialdehyde dehydrogenase n=1 Tax=Dyella ginsengisoli RepID=UPI000344AD89 rbh
aspartate-semialdehyde dehydrogenase
scnpilot_p_inoc_scaffold_56_200
unknown

Not on your lists

210926..211249
DNA (324bp) protein (108aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_56_201
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

211388..213481
DNA (2094bp) protein (698aa)
FimV N-terminal domain-containing protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WLE9_9GAMM
fimbrial protein FimV
Fimbrial protein FimV {ECO:0000313|EMBL:AIF48564.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
scnpilot_p_inoc_scaffold_56_202
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

213496..214269
DNA (774bp) protein (258aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy
tRNA pseudouridine synthase A n=1 Tax=Dyella ginsengisoli RepID=UPI00035E89A3 rbh
tRNA pseudouridine synthase A
scnpilot_p_inoc_scaffold_56_203
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

214266..214904
DNA (639bp) protein (213aa)
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123216}; Short=PRAI {ECO:0000256|HAMAP-Rule:MF_00135};; EC=5.3.1.24 {ECO:0000256|HAMAP-Rule:MF_0013
N-(5'-phosphoribosyl)anthranilate isomerase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WVF0_9GAMM
phosphoribosylanthranilate isomerase
scnpilot_p_inoc_scaffold_56_204
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

214901..215932
DNA (1032bp) protein (344aa)
Pass1-like protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRE1_9GAMM rbh
hypothetical protein Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
hypothetical protein
scnpilot_p_inoc_scaffold_56_205
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(216050..217438)
DNA (1389bp) protein (463aa)
MFS transporter, SP family protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VVX3_9GAMM rbh
D-galactose transporter {ECO:0000313|EMBL:GAN44973.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibact
D-galactose transporter GalP
scnpilot_p_inoc_scaffold_56_206
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(217501..219174)
DNA (1674bp) protein (558aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00030750FE rbh
trehalase
Trehalase {ECO:0000313|EMBL:AIF47010.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
scnpilot_p_inoc_scaffold_56_207
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(219347..220387)
DNA (1041bp) protein (347aa)
LacI family transcription regulator n=1 Tax=Dyella ginsengisoli RepID=UPI00034D875D
LacI family transcriptional regulator {ECO:0000313|EMBL:KGI77569.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="O
transcriptional regulator
scnpilot_p_inoc_scaffold_56_208
unknown

Not on your lists

comp(220365..220961)
DNA (597bp) protein (199aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_56_209
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

221162..223795
DNA (2634bp) protein (878aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000382D88B rbh
TonB-dependent receptor {ECO:0000313|EMBL:EIL96539.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter t
outer membrane receptor protein
scnpilot_p_inoc_scaffold_56_210
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

223997..226249
DNA (2253bp) protein (751aa)
Trehalose/maltose hydrolase or phosphorylase n=1 Tax=Rhodanobacter denitrificans RepID=M4NB95_9GAMM rbh
trehalose/maltose hydrolase or phosphorylase Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
trehalose/maltose hydrolase or phosphorylase
Displaying items 181-210 of 419 in total

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