ggKbase home page

scnpilot_p_inoc_scaffold_56

Search features with annotation key words

Displaying items 151-180 of 419 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_56_151
unknown

Not on your lists

167085..167555
DNA (471bp) protein (157aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_56_152
unknown

Not on your lists

167583..168104
DNA (522bp) protein (174aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_56_153
unknown

Not on your lists

168598..168984
DNA (387bp) protein (129aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_56_154
unknown

Not on your lists

169047..169289
DNA (243bp) protein (81aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_56_155
unknown

Not on your lists

comp(170089..170232)
DNA (144bp) protein (48aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_56_156
unknown

Not on your lists

170557..170730
DNA (174bp) protein (58aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_56_157
Thauera phenylacetica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

170727..170990
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Thauera phenylacetica B4P RepID=N6ZTA2_9RHOO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ENO97722.1}; TaxID=1234382 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera phenylacetica B4P.
scnpilot_p_inoc_scaffold_56_158
Burkholderia sp. BT03, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

171076..171399
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. BT03 RepID=J3BWZ5_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EUC15722.1}; TaxID=1144309 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp.
putative HicB family protein
scnpilot_p_inoc_scaffold_56_159
unknown

Not on your lists

comp(171503..171757)
DNA (255bp) protein (85aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_56_160

Not on your lists

comp(171901..172377)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=T1ARU3_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD44760.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
scnpilot_p_inoc_scaffold_56_161
unknown

Not on your lists

172440..172655
DNA (216bp) protein (72aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_56_162
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

172747..173427
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NE52_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG88999.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter de
scnpilot_p_inoc_scaffold_56_163
endosymbiont of unidentified scaly snail isolate Monju, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

173530..174528
DNA (999bp) protein (333aa)
Translation initiation factor IF-2 n=1 Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6BTK1_9GAMM
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=1248727 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="endosymbiont of uni
translation initiation factor IF-2
scnpilot_p_inoc_scaffold_56_164
unknown

Not on your lists

174588..175058
DNA (471bp) protein (157aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_56_165
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

175195..175671
DNA (477bp) protein (159aa)
Peptidase S24/S26A/S26B, conserved region protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TXF1_ALIDB
peptidase s24/s26a/s26b
Peptidase S24/S26A/S26B, conserved region {ECO:0000313|EMBL:AEB84440.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="
scnpilot_p_inoc_scaffold_56_166
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

175655..176647
DNA (993bp) protein (331aa)
DNA-directed DNA polymerase (EC:2.7.7.7)
UmuC protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L8L1_9GAMM rbh
UmuC protein {ECO:0000313|EMBL:EED37945.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA
scnpilot_p_inoc_scaffold_56_167
Cupriavidus sp. HMR-1, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(176928..178148)
DNA (1221bp) protein (407aa)
Major facilitator transporter n=1 Tax=Cupriavidus sp. HMR-1 RepID=L2EDN3_9BURK
Major facilitator transporter {ECO:0000313|EMBL:EKZ97450.1}; TaxID=1249621 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus
major Facilitator Superfamily protein
scnpilot_p_inoc_scaffold_56_168
Cupriavidus sp. SK-3, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(178358..178960)
DNA (603bp) protein (201aa)
MerR family transcriptional regulator n=1 Tax=Rhodanobacter sp. 115 RepID=I4VHX1_9GAMM
MerR family transcriptional regulator {ECO:0000313|EMBL:KDP87231.1}; TaxID=1470558 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupr
merR regulatory family protein
scnpilot_p_inoc_scaffold_56_169
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(178957..180147)
DNA (1191bp) protein (397aa)
Electron transporter, disulfide bond oxidoreductase D (DsbD) family n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F4T0_ACIC5 rbh
disulfide bond oxidoreductase D
Electron transporter, disulfide bond oxidoreductase D (DsbD) family {ECO:0000313|EMBL:ACO34571.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;"
scnpilot_p_inoc_scaffold_56_170
Burkholderia fungorum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(180144..180416)
DNA (273bp) protein (91aa)
heavy-metal-associated domain protein
copper chaperone id=12556472 bin=CNBR_ACIDO species=Rhodanobacter sp. 115 genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Heavy-metal-associated domain protein {ECO:0000313|EMBL:AJZ56452.1}; TaxID=134537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burk
scnpilot_p_inoc_scaffold_56_171
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(180511..182979)
DNA (2469bp) protein (823aa)
heavy metal translocating P-type ATPase (EC:3.6.3.-)
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:ACO32456.1}; EC=3.6.3.- {ECO:0000313|EMBL:ACO32456.1};; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Ac
Heavy metal translocating P-type ATPase n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F4S8_ACIC5
scnpilot_p_inoc_scaffold_56_172
Salinisphaera hydrothermalis, Salinisphaera, Salinisphaerales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(183219..184538)
DNA (1320bp) protein (440aa)
arylsulfatase n=1 Tax=Halomonas zhanjiangensis RepID=UPI000377D40E
Arsenical pump membrane protein {ECO:0000256|RuleBase:RU004993}; TaxID=1304275 species="Bacteria; Proteobacteria; Gammaproteobacteria; Salinisphaerales; Salinisphaeraceae; Salinisphaera.;" source="Sal
arsB; arsenite-antimonite efflux pump ArsB
scnpilot_p_inoc_scaffold_56_173
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(184558..185091)
DNA (534bp) protein (178aa)
Protein-tyrosine phosphatase, low molecular weight n=2 Tax=mine drainage metagenome RepID=T1BSA2_9ZZZZ
Arsenate reductase {ECO:0000313|EMBL:GAN45638.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter se
arsenate reductase
scnpilot_p_inoc_scaffold_56_174
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(185088..185561)
DNA (474bp) protein (158aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VJE6_9GAMM
Glyoxalase {ECO:0000313|EMBL:GAN45639.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.
glyoxalase
scnpilot_p_inoc_scaffold_56_175
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(185558..185872)
DNA (315bp) protein (105aa)
ArsR family transcriptional regulator n=1 Tax=mine drainage metagenome RepID=T0YUU2_9ZZZZ
ArsR family transcriptional regulator {ECO:0000313|EMBL:GAN45640.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source=
ArsR family transcriptional regulator
scnpilot_p_inoc_scaffold_56_176
unknown

Not on your lists

comp(186266..186850)
DNA (585bp) protein (195aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_56_177

Not on your lists

comp(186861..187298)
DNA (438bp) protein (146aa)
Transcriptional regulator, XRE family n=2 Tax=mine drainage metagenome RepID=T0YYV8_9ZZZZ
Transcriptional regulator, XRE family {ECO:0000313|EMBL:EQD38243.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
helix-turn-helix domain-containing protein
scnpilot_p_inoc_scaffold_56_178

Not on your lists

187841..189346
DNA (1506bp) protein (502aa)
Integrase catalytic subunit n=2 Tax=mine drainage metagenome RepID=T0Z1Y1_9ZZZZ rbh
Integrase catalytic subunit {ECO:0000313|EMBL:EQD38242.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
integrase catalytic subunit
scnpilot_p_inoc_scaffold_56_179

Not on your lists

189357..190094
DNA (738bp) protein (246aa)
Transposition helper protein n=1 Tax=mine drainage metagenome RepID=T0XYY4_9ZZZZ rbh
Transposition helper protein {ECO:0000313|EMBL:EQD26098.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
IstB-like ATP binding protein
scnpilot_p_inoc_scaffold_56_180
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

190231..190527
DNA (297bp) protein (99aa)
DNA-directed DNA polymerase (EC:2.7.7.7)
UmuC protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L8L1_9GAMM
UmuC protein {ECO:0000313|EMBL:EED37945.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA
Displaying items 151-180 of 419 in total

View Taxonomy