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scnpilot_p_inoc_scaffold_58_216

Organism: SCNpilot_P_inoc_Xanthomonadales_65_14

near complete RP 52 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: comp(247219..250233)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=666685 species="Bacteria; Proteobacteria; Gam similarity UNIPROT
DB: UniProtKB
  • Identity: 57.2
  • Coverage: 999.99
  • Bit_score: 1053
  • Evalue 0.0
Ribonuclease E n=1 Tax=Rhodanobacter denitrificans RepID=I4WXG6_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 58.0
  • Coverage: 999.99
  • Bit_score: 1057
  • Evalue 0.0
  • rbh
ribonuclease, Rne/Rng family similarity KEGG
DB: KEGG
  • Identity: 57.2
  • Coverage: 999.99
  • Bit_score: 1053
  • Evalue 0.0

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3015
ATGAAACGCATGTTGATCAACGCGACTCAGCGTGAGGAGTTGCGTGTGGCCATCGTCGATGGCCAGGCCCTGTACGACCTCGACCTCGAAATCCCCTCGCGCGAACAAAAGAAGTCGAACATCTACAAGGCCCGCATCACCCGGGTCGAACCTTCCCTCGAAGCCTGCTTCGTCGATTACGGCGCCGAACGCCACGGCTTCCTGCCACTGAAGGAAATCGCCCGCGAATACTTCGCGCAGGGGGTCGACCACAACAAGGCCGGCATCCGCGAACTGCTGAAGGAAGGCCAGCAGCTGATCGTGCAGGTCGAGAAGGAGGAACGCGGCAACAAGGGCGCCGCGCTCACCACTTATATCTCGCTGGCCGGCCGTTACATGGTGCTGATGCCCAACAGCCCGAACGCGGGCGGTGTCTCGCGCCGCATCGAGGGCGAGGACCGGCAGGCCCTGAAGGAAGCCCTGCAACACATTTCGGTGCCCGAGGAAATGGGCCTGATCGTGCGTACCGCCGGCGTCGGCCGCGACGCCGAGGAACTGCAGTGGGACCTCGACTACCTGCTGACCCTGTGGAAGGCCATCTCGGAAGCCGCCGCGGCGCGCTCCGCGCCGTTCCTGATCTACCAGGAATCCAAACTGTTCATCCGCGCGCTGCGCGACTATTTGCGCGCCGACATCGGCGAAATCCTGATCGACGAACCCGCGTTGTACGAAGACGCGAAACAGTTCATGCAGCAGGTGATGCCGAACAGCCTGCGCAAACTCAAGCTCTACAGCGACGACGTACCGCTGTTCACGCGCTTCCAGATCGAAACCCAGATCGAGAGTGCCTACGACCGCAACGTGCGGCTGCCGTCCGGCGGCTCGATCGTGATCGACCCGACCGAGGCGTTGACTTCCATCGACATCAACTCCTCGCGCGCCACCAAGGGCAGCGACATCGAAGACACCGCGTTCCGCACCAATTGCGAAGCCGCGGTCGAAGTCGCGCGCCAGTTGCGCATCCGCGACCTCGGCGGTCTGGTGGTGATCGACTTCATCGACATGGAAAGCTCGCGCCACCAGCGCGAGGTCGAAGACAAACTGCGCGACGCGCTGAAACTCGACCGTGCACGCGTGCAGCTCGGCCGCATTTCGCGTTTCGGCCTGATGGAGCTTTCCCGCCAACGCTTGCGCCCGAGCCTCGATGAATCCACCCAGATCGTGTGCCCGCGCTGCGAAGGCCACGGCCGCATCCGCGGCATCGAGTCGCTGTCGCTCTCGGCGCTGCGCCTGATCGAAGAGCACGCGATGAAGGAAAACACCGGGCAGGTGCTGGTGCAGGCGCCAACCCGCGTGGCCAATTTCCTGCTCAACGAGAAGCGTTCCAGCGTGGTCGAAATCGAATTGCGCCACAAGGTGCACGTGGTGATCGTCGCCGACGAGAACCTGGAAACGCCGCACCTCGAAATCACCCGCATCCGCGAAAGCGAGATGGGCGAGCACGCCAAGCCGAGCTACGAGCGCCTGACCGAAGTCGCGGCCACGCCGCAACCGCGCATGGGCGTGGTGGTGCACGGCGAGGAACCCGCGGTCAGCGGCATCCAGCGCGCCACGCCGATGCCGCAGCGCGAGGAAGTCGAACCTGTTTCCGCGCCGATCGCTGCCGCTGCGCCGGCGGCGGCGTCGGGCGGCTTGCTCGGACGCCTGTTCGGCTGGTTCCGTGCCCCGCCTGCAGCCGAACCCACGCTCGCGGAACTGACACAGGCGCCACGCACGCCGCCACGCAGCGACAACACGGCCCGTCGCGAACGCACGTCCGAACGCCGTGGCGAGGCATCCAGCCACAACGGCGCGCGCCGCAACGGCCACGATCGTGATCGCGACGGCGATGCCCGCCGCGGGCGCCAGCAGGGCCAGCAGCCATCGAAAGGTTCACAGGCCAAACCGAACAAGTCGCGTGCGGAAGATTCGCAGCGCCAGCCGCGCCAGGGCCAGAAGCCGGCGGCATCCGCCGCAGTGAAACCCGCCGGCGAAACGCACGCCCAGGAAACCAGGCCTGCCCGCAGCGAACCGGCAACGCCGCGACATGAAACGCAGCGCCCGGCTGCAGCAACGCCCGTGTCTGCGCCCGCCGCCGACCCCATAGCCGCAAAACCCGCTGGCGTGCCCGCAGGCGCTGCTGAAACAAGCACCGCGCCGAACGCAGCGCCCGCCGATGATGCATCCGCCGGCACCGGCAAGCGCCGTCGTGGACGCCGTGGTGGACGCCGCCGCAAGCACGCCAACGCGACCGCGCAGAATGGCAACGCACCCGGCGCACCACGCGATATCGACGACGAAGACGCCGATCGCAGCCATGCGGCTTCCGTTGCGGCGCCGATTGCGCCGCCCGTGAACCGCGCACCGGAACCGTCGCGCGCAGCGGAAACATCTCCCGCGACGACGGCTCCGGCGGCGCCTTCCGGCGCGCCGTCGCGGGAGAGCGCGCCCACCACCGCGCCGCTGTTCACGACGCCCGAACACAAGCCGGACACATCGGGGCCGGTCGCCCCGCCGTTGCAACCGGCCGCTGTGGCAAATCCGCAGCCAACCGCCGCGACGCGTGCTCCGATGCCTGTGCACACTCCCGAACAACCGGGTACATCCGCCGCGCCGCCCGCCACGCCTGCGCCGATGCCCTCGACGCCGGTGCTACCATCGGCTGCCGTGCGCGCACCGCAACCCGCACCTGCGCCGCAACCGGCAATCACGACGCCACCCGTAGCGCCTGCCGTGGCCGCCCCGGTCGGCCCGACCGTGTCGGCCGCGCCGAAAACCGAACCCGTGACGCCATCGCTGTTCGCGGCGCCACCTTCCGCGCGGCCCACCGTGCAACCGCTGCCGCGGCATCCGGCCATCCCGACGCAACGCCCGTTGTCCGGGGCGATACGGCCGATCCTGGCGCCGAGCGTGCCGACGACCAAGACCCCGCCAGCCAACCCCGCGCCGCCTGCCGAAGCCCAGCCGCCGTCATCCGACAAGGGCGCGGCGGAGTAG
PROTEIN sequence
Length: 1005
MKRMLINATQREELRVAIVDGQALYDLDLEIPSREQKKSNIYKARITRVEPSLEACFVDYGAERHGFLPLKEIAREYFAQGVDHNKAGIRELLKEGQQLIVQVEKEERGNKGAALTTYISLAGRYMVLMPNSPNAGGVSRRIEGEDRQALKEALQHISVPEEMGLIVRTAGVGRDAEELQWDLDYLLTLWKAISEAAAARSAPFLIYQESKLFIRALRDYLRADIGEILIDEPALYEDAKQFMQQVMPNSLRKLKLYSDDVPLFTRFQIETQIESAYDRNVRLPSGGSIVIDPTEALTSIDINSSRATKGSDIEDTAFRTNCEAAVEVARQLRIRDLGGLVVIDFIDMESSRHQREVEDKLRDALKLDRARVQLGRISRFGLMELSRQRLRPSLDESTQIVCPRCEGHGRIRGIESLSLSALRLIEEHAMKENTGQVLVQAPTRVANFLLNEKRSSVVEIELRHKVHVVIVADENLETPHLEITRIRESEMGEHAKPSYERLTEVAATPQPRMGVVVHGEEPAVSGIQRATPMPQREEVEPVSAPIAAAAPAAASGGLLGRLFGWFRAPPAAEPTLAELTQAPRTPPRSDNTARRERTSERRGEASSHNGARRNGHDRDRDGDARRGRQQGQQPSKGSQAKPNKSRAEDSQRQPRQGQKPAASAAVKPAGETHAQETRPARSEPATPRHETQRPAAATPVSAPAADPIAAKPAGVPAGAAETSTAPNAAPADDASAGTGKRRRGRRGGRRRKHANATAQNGNAPGAPRDIDDEDADRSHAASVAAPIAPPVNRAPEPSRAAETSPATTAPAAPSGAPSRESAPTTAPLFTTPEHKPDTSGPVAPPLQPAAVANPQPTAATRAPMPVHTPEQPGTSAAPPATPAPMPSTPVLPSAAVRAPQPAPAPQPAITTPPVAPAVAAPVGPTVSAAPKTEPVTPSLFAAPPSARPTVQPLPRHPAIPTQRPLSGAIRPILAPSVPTTKTPPANPAPPAEAQPPSSDKGAAE*