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scnpilot_p_inoc_scaffold_58

Search features with annotation key words

Displaying items 211-240 of 287 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_58_211
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(241505..242026)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WTP2_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG88371.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sourc
scnpilot_p_inoc_scaffold_58_212
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(242023..243048)
DNA (1026bp) protein (342aa)
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase n=1 Tax=Rhodanobacter denitrificans RepID=I4WTP3_9GAMM
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase {ECO:0000313|EMBL:KJV37077.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacte
putative TIM-barrel fold metal-dependent hydrolase
scnpilot_p_inoc_scaffold_58_213
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(243149..245233)
DNA (2085bp) protein (695aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00030A4BA1 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF47511.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
scnpilot_p_inoc_scaffold_58_214
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(245330..246460)
DNA (1131bp) protein (377aa)
Pyridoxal-5'-phosphate-dependent enzyme, beta subunit n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VK00_9GAMM rbh
Pyridoxal-5'-phosphate-dependent enzyme, beta subunit {ECO:0000313|EMBL:EIL87541.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobac
cysteine synthase
scnpilot_p_inoc_scaffold_58_215
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

246484..247140
DNA (657bp) protein (219aa)
histidine kinase n=1 Tax=Dyella japonica RepID=UPI00030665D0
histidine kinase
Histidine kinase {ECO:0000313|EMBL:AIF47870.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
scnpilot_p_inoc_scaffold_58_216
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(247219..250233)
DNA (3015bp) protein (1005aa)
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=666685 species="Bacteria; Proteobacteria; Gam
Ribonuclease E n=1 Tax=Rhodanobacter denitrificans RepID=I4WXG6_9GAMM rbh
ribonuclease, Rne/Rng family
scnpilot_p_inoc_scaffold_58_217
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

250572..251516
DNA (945bp) protein (315aa)
ribosomal large subunit pseudouridine synthase C (EC:5.4.99.-) Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
ribosomal large subunit pseudouridine synthase C (EC:5.4.99.-)
Pseudouridine synthase n=1 Tax=Rhodanobacter denitrificans RepID=M4NDY9_9GAMM
scnpilot_p_inoc_scaffold_58_218
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

251628..252974
DNA (1347bp) protein (449aa)
Nucleotide sugar dehydrogenase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VJW3_9GAMM
Nucleotide sugar dehydrogenase {ECO:0000313|EMBL:EIL87504.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanob
UDP-glucose 6-dehydrogenase
scnpilot_p_inoc_scaffold_58_219
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

252981..253196
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPK8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM01400.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter t
hypothetical protein
scnpilot_p_inoc_scaffold_58_220
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

253199..253732
DNA (534bp) protein (178aa)
Nucleoprotein/polynucleotide-associated enzyme n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPK9_9GAMM
Nucleoprotein/polynucleotide-associated enzyme {ECO:0000313|EMBL:EIM01401.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;"
hypothetical protein
scnpilot_p_inoc_scaffold_58_221
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(253802..254992)
DNA (1191bp) protein (397aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q026A5_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ83164.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source=
scnpilot_p_inoc_scaffold_58_222
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

255319..256188
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VY63_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL92154.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
membrane protein
scnpilot_p_inoc_scaffold_58_223
unknown

Not on your lists

comp(256266..256772)
DNA (507bp) protein (169aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_58_224
Lysobacter defluvii, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(256814..258724)
DNA (1911bp) protein (637aa)
hypothetical protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI00037EACA4
transporter
Serine protease {ECO:0000313|EMBL:KGO98333.1}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvii IMMIB
scnpilot_p_inoc_scaffold_58_225
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

258873..260684
DNA (1812bp) protein (604aa)
Transcriptional regulator domain-containing protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WH96_9GAMM rbh
Transcriptional regulator {ECO:0000313|EMBL:KGQ20597.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdo
hypothetical protein
scnpilot_p_inoc_scaffold_58_226
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

260707..261144
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CLS3_MYXFH
Uncharacterized protein {ECO:0000313|EMBL:KFE70350.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyal
hypothetical protein
scnpilot_p_inoc_scaffold_58_227
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(261171..263258)
DNA (2088bp) protein (696aa)
3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.35 4.2.1.17)
Putative enoyl-CoA hydratasee n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPL0_9GAMM rbh
Putative enoyl-CoA hydratasee {ECO:0000313|EMBL:EIM01402.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanoba
scnpilot_p_inoc_scaffold_58_228
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

263444..265741
DNA (2298bp) protein (766aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00031D4275
Diguanylate cyclase {ECO:0000313|EMBL:KJV33230.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis
diguanylate cyclase
scnpilot_p_inoc_scaffold_58_229
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

265929..266516
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000376D47E
RNA polymerase sigma factor RpoE {ECO:0000313|EMBL:EIL95143.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodan
RNA polymerase, sigma-24 subunit, RpoE
scnpilot_p_inoc_scaffold_58_230
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

266562..267227
DNA (666bp) protein (222aa)
Negative regulator of sigma E activity n=1 Tax=Rhodanobacter denitrificans RepID=I4WR81_9GAMM
negative regulator of sigma E activity
Negative regulator of sigma E activity {ECO:0000313|EMBL:AGG89347.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="R
scnpilot_p_inoc_scaffold_58_231

Not on your lists

267397..268836
DNA (1440bp) protein (480aa)
Protease Do n=4 Tax=mine drainage metagenome RepID=T0Y1C4_9ZZZZ
Protease Do {ECO:0000313|EMBL:EQD28881.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
protease Do
scnpilot_p_inoc_scaffold_58_232
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

269188..270057
DNA (870bp) protein (290aa)
Beta-lactamase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W1M7_9GAMM rbh
Beta-lactamase {ECO:0000313|EMBL:EIL93368.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
metallo-beta-lactamase
scnpilot_p_inoc_scaffold_58_233
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

270067..271101
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VYF7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KJV36269.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojue
hypothetical protein
scnpilot_p_inoc_scaffold_58_234
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

271204..272103
DNA (900bp) protein (300aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002EB2491 rbh
beta-lactamase
Beta-lactamase {ECO:0000313|EMBL:AIF49264.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
scnpilot_p_inoc_scaffold_58_235
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(272105..272668)
DNA (564bp) protein (188aa)
NTP pyrophosphohydrolase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W1M5_9GAMM
NTP pyrophosphohydrolase {ECO:0000313|EMBL:EIL93366.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter
DNA mismatch repair protein MutT
scnpilot_p_inoc_scaffold_58_236
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(272665..273594)
DNA (930bp) protein (310aa)
exodeoxyribonuclease IX n=1 Tax=Dyella japonica RepID=UPI0003126DB4
exodeoxyribonuclease IX
Exodeoxyribonuclease IX {ECO:0000313|EMBL:AIF49155.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
scnpilot_p_inoc_scaffold_58_237
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(273591..274184)
DNA (594bp) protein (198aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037A5D1B
nitroreductase
Nitroreductase {ECO:0000313|EMBL:AHX14324.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
scnpilot_p_inoc_scaffold_58_238
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

274255..275358
DNA (1104bp) protein (368aa)
NAD(P) transhydrogenase subunit alpha n=1 Tax=Dyella japonica RepID=UPI0002DF6BC6
NAD(P) transhydrogenase subunit alpha
NAD(P) transhydrogenase subunit alpha {ECO:0000313|EMBL:AIF49152.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella j
scnpilot_p_inoc_scaffold_58_239
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

275516..276517
DNA (1002bp) protein (334aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037A7571
Uncharacterized protein {ECO:0000313|EMBL:KJV26463.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojue
scnpilot_p_inoc_scaffold_58_240
Hapalosiphon welwitschii, Hapalosiphon, Stigonematales, Cyanobacteria, Bacteria

Not on your lists

276533..281860
DNA (5328bp) protein (1776aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037BAFF3 rbh
HapE {ECO:0000313|EMBL:AHF22420.1}; TaxID=1433842 species="Bacteria; Cyanobacteria; Stigonematales; Hapalosiphon.;" source="Hapalosiphon welwitschii UTEX B 1830.;"
polyketide synthase subunit
Displaying items 211-240 of 287 in total

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