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scnpilot_p_inoc_scaffold_58

Search features with annotation key words

Displaying items 181-210 of 287 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_58_181
unknown

Not on your lists

comp(209071..210075)
DNA (1005bp) protein (335aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_58_182

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comp(210069..211364)
DNA (1296bp) protein (432aa)
Marine sediment metagenome DNA, contig: S06H3_S21344 {ECO:0000313|EMBL:GAI48295.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
scnpilot_p_inoc_scaffold_58_183
R_Gammaproteobacteria_56_15, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(211365..212483)
DNA (1119bp) protein (373aa)
Hopene-associated glycosyltransferase HpnB n=1 Tax=mine drainage metagenome RepID=T1AI51_9ZZZZ rbh
family 2 glycosyl transferase Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_56_15_curated
Glycosyl transferase, family 2
scnpilot_p_inoc_scaffold_58_184
Salinisphaera hydrothermalis, Salinisphaera, Salinisphaerales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(212506..213636)
DNA (1131bp) protein (377aa)
Radical SAM domain Fe-S oxidoreductase n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BPA0_9GAMM rbh
Hopanoid biosynthesis associated radical SAM protein HpnH {ECO:0000313|EMBL:KEZ77090.1}; TaxID=1304275 species="Bacteria; Proteobacteria; Gammaproteobacteria; Salinisphaerales; Salinisphaeraceae; Sali
radical SAM domain-containing protein
scnpilot_p_inoc_scaffold_58_185
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(213812..214411)
DNA (600bp) protein (200aa)
isopentenyl-diphosphate delta-isomerase (EC:5.3.3.2)
Isopentenyl-diphosphate Delta-isomerase {ECO:0000256|HAMAP-Rule:MF_00202}; Short=IPP isomerase {ECO:0000256|HAMAP-Rule:MF_00202};; EC=5.3.3.2 {ECO:0000256|HAMAP-Rule:MF_00202};; IPP:DMAPP isomerase {E
Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Rhodanobacter denitrificans RepID=I4WUH0_9GAMM
scnpilot_p_inoc_scaffold_58_186
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(214404..216662)
DNA (2259bp) protein (753aa)
3-hydroxy-3-methylglutaryl-coenzyme A reductase (EC:1.1.1.34 2.7.1.36)
3-hydroxy-3-methylglutaryl coenzyme A reductase {ECO:0000256|RuleBase:RU361219}; Short=HMG-CoA reductase {ECO:0000256|RuleBase:RU361219};; EC=1.1.1.88 {ECO:0000256|RuleBase:RU361219};; TaxID=666685 sp
Hydroxymethylglutaryl-CoA reductase n=1 Tax=Rhodanobacter denitrificans RepID=I4WUG9_9GAMM rbh
scnpilot_p_inoc_scaffold_58_187
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(216683..217708)
DNA (1026bp) protein (342aa)
Mevalonate kinase n=3 Tax=Rhodanobacter denitrificans RepID=M4NUA0_9GAMM
mevalonate kinase
Mevalonate kinase {ECO:0000313|EMBL:AGG90996.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rho
scnpilot_p_inoc_scaffold_58_188
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(217705..218700)
DNA (996bp) protein (332aa)
diphosphomevalonate decarboxylase (EC:4.1.1.33)
Diphosphomevalonate decarboxylase {ECO:0000313|EMBL:AGG90995.1}; EC=4.1.1.33 {ECO:0000313|EMBL:AGG90995.1};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanth
diphosphomevalonate decarboxylase n=1 Tax=Nevskia ramosa RepID=UPI0003B66EC8 rbh
scnpilot_p_inoc_scaffold_58_189
Nitrococcus mobilis, Nitrococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(218923..219915)
DNA (993bp) protein (331aa)
Dihydrokaempferol 4-reductase n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BTL0_9GAMM rbh
Dihydrokaempferol 4-reductase {ECO:0000313|EMBL:EAR20966.1}; TaxID=314278 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Nitrococcus.;" source="Nitrococc
NAD-dependent dehydratase
scnpilot_p_inoc_scaffold_58_190
Methylomonas methanica, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(219912..220655)
DNA (744bp) protein (248aa)
Hopanoid-associated phosphorylase n=1 Tax=Methylomonas methanica (strain MC09) RepID=G0A748_METMM
hopanoid-associated phosphorylase
Hopanoid-associated phosphorylase {ECO:0000313|EMBL:AEG01842.1}; TaxID=857087 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Methylo
scnpilot_p_inoc_scaffold_58_191
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(220630..222573)
DNA (1944bp) protein (648aa)
squalene-hopene cyclase (EC:5.4.99.17)
Squalene-hopene cyclase {ECO:0000313|EMBL:ADE14461.1}; EC=5.4.99.17 {ECO:0000313|EMBL:ADE14461.1};; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Ni
Squalene-hopene cyclase n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C0D5_NITHN rbh
scnpilot_p_inoc_scaffold_58_192
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(222577..223710)
DNA (1134bp) protein (378aa)
Squalene/phytoene synthase n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C0D6_NITHN rbh
Squalene/phytoene synthase
Squalene/phytoene synthase {ECO:0000313|EMBL:ADE14462.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halop
scnpilot_p_inoc_scaffold_58_193
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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223901..224785
DNA (885bp) protein (295aa)
Farnesyl-diphosphate synthase n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GN63_THISH
farnesyl-diphosphate synthase
Farnesyl-diphosphate synthase {ECO:0000313|EMBL:ACL71924.1}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thio
scnpilot_p_inoc_scaffold_58_194
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(225023..226108)
DNA (1086bp) protein (362aa)
Ribonuclease D n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDD4_9GAMM rbh
Ribonuclease D {ECO:0000313|EMBL:EIL97475.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydan
ribonuclease D
scnpilot_p_inoc_scaffold_58_195
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

226195..228117
DNA (1923bp) protein (641aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034B7EA5 rbh
sulfatase-modifying factor protein
Sulfatase-modifying factor protein {ECO:0000313|EMBL:AHX13656.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jian
scnpilot_p_inoc_scaffold_58_196
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(228131..228916)
DNA (786bp) protein (262aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037AD5C2
Uncharacterized protein {ECO:0000313|EMBL:AKC88265.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxantho
fructosamine-3-kinase
scnpilot_p_inoc_scaffold_58_197
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(229105..229692)
DNA (588bp) protein (196aa)
Putative cysteine dioxygenase type I n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W062_9GAMM
Putative cysteine dioxygenase type I {ECO:0000313|EMBL:EIL92853.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rh
putative metal-dependent enzyme of the double-stranded beta helix superfamily
scnpilot_p_inoc_scaffold_58_198
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(229715..230872)
DNA (1158bp) protein (386aa)
Homoserine O-acetyltransferase {ECO:0000256|HAMAP-Rule:MF_00296, ECO:0000256|SAAS:SAAS00070949}; EC=2.3.1.31 {ECO:0000256|HAMAP-Rule:MF_00296, ECO:0000256|SAAS:SAAS00070942};; Homoserine O-trans-acety
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00038217F9
homoserine acetyltransferase
scnpilot_p_inoc_scaffold_58_199
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(231080..232147)
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WWJ5_9GAMM rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89496.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sourc
scnpilot_p_inoc_scaffold_58_200
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(232144..232584)
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002FBCAAA
cytochrome C biogenesis protein
Cytochrome C biogenesis protein {ECO:0000313|EMBL:AIF47677.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonic
scnpilot_p_inoc_scaffold_58_201
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(232728..233291)
DNA (564bp) protein (188aa)
Periplasmic protein thiol:disulfide oxidoreductase, DsbE subfamily n=1 Tax=Rhodanobacter sp. 115 RepID=I4WT32_9GAMM
Periplasmic protein thiol:disulfide oxidoreductase, DsbE subfamily {ECO:0000313|EMBL:EIM02624.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadacea
thiol:disulfide interchange protein
scnpilot_p_inoc_scaffold_58_202
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(233288..235273)
DNA (1986bp) protein (662aa)
C-type cytochrome biogenesis membrane protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W057_9GAMM
cytochrome C biogenesis protein
C-type cytochrome biogenesis membrane protein {ECO:0000313|EMBL:EIL92848.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" s
scnpilot_p_inoc_scaffold_58_203
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(235270..235845)
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036EC998
Cytochrome c-type biogenesis protein CcmE {ECO:0000256|HAMAP-Rule:MF_01959}; Cytochrome c maturation protein E {ECO:0000256|HAMAP-Rule:MF_01959}; Heme chaperone CcmE {ECO:0000256|HAMAP-Rule:MF_01959};
cytochrome C biogenesis protein CcmE
scnpilot_p_inoc_scaffold_58_204
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(235842..236036)
DNA (195bp) protein (65aa)
Cytochrome C biogenesis protein CcmD n=1 Tax=Rhodanobacter sp. 115 RepID=I4WT35_9GAMM
Cytochrome C biogenesis protein CcmD {ECO:0000313|EMBL:EIM02627.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rh
hemagglutination activity protein
scnpilot_p_inoc_scaffold_58_205
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(236174..236953)
DNA (780bp) protein (260aa)
Heme exporter protein CcmC n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WP87_9GAMM rbh
Heme exporter protein CcmC {ECO:0000313|EMBL:EIM01279.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacte
heme exporter protein CcmC
scnpilot_p_inoc_scaffold_58_206
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(236955..237698)
DNA (744bp) protein (248aa)
Heme exporter protein B n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W053_9GAMM rbh
Heme exporter protein B {ECO:0000256|PIRNR:PIRNR002764}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter
heme ABC transporter permease
scnpilot_p_inoc_scaffold_58_207
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(237711..238349)
DNA (639bp) protein (213aa)
Cytochrome c biogenesis ATP-binding export protein CcmA {ECO:0000256|HAMAP-Rule:MF_01707}; EC=3.6.3.41 {ECO:0000256|HAMAP-Rule:MF_01707};; Heme exporter protein A {ECO:0000256|HAMAP-Rule:MF_01707}; Ta
cytochrome C biogenesis protein CcmA n=1 Tax=Dyella ginsengisoli RepID=UPI0003608661
heme ABC exporter, ATP-binding protein CcmA
scnpilot_p_inoc_scaffold_58_208
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(238413..238829)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WWI6_9GAMM
Protein of unknown function (DUF3293)
Uncharacterized protein {ECO:0000313|EMBL:AGG89487.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter de
scnpilot_p_inoc_scaffold_58_209
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(238834..240204)
DNA (1371bp) protein (457aa)
Kynurenine 3-monooxygenase {ECO:0000256|HAMAP-Rule:MF_01971}; EC=1.14.13.9 {ECO:0000256|HAMAP-Rule:MF_01971};; Kynurenine 3-hydroxylase {ECO:0000256|HAMAP-Rule:MF_01971}; TaxID=345309 species="Bacteri
Kynurenine 3-monooxygenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W050_9GAMM rbh
kynurenine 3-monooxygenase
scnpilot_p_inoc_scaffold_58_210
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(240201..241508)
DNA (1308bp) protein (436aa)
Kynureninase {ECO:0000256|HAMAP-Rule:MF_01970, ECO:0000256|PIRNR:PIRNR038800}; EC=3.7.1.3 {ECO:0000256|HAMAP-Rule:MF_01970, ECO:0000256|PIRNR:PIRNR038800};; L-kynurenine hydrolase {ECO:0000256|HAMAP-R
Kynureninase (EC:3.7.1.3)
kynureninase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B6CB5B
Displaying items 181-210 of 287 in total

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