ggKbase home page

scnpilot_p_inoc_scaffold_451

Search features with annotation key words

Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_451_1
Flavobacterium enshiense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1..4722)
DNA (4722bp) protein (1574aa)
Uncharacterized protein n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SSF2_9FLAO rbh
Uncharacterized protein {ECO:0000313|EMBL:KGO97092.1}; TaxID=1107311 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium ens
hypothetical protein
scnpilot_p_inoc_scaffold_451_2
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4868..5176)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9) RepID=H8XVV8_FLAIG
Uncharacterized protein {ECO:0000313|EMBL:KGO87024.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sun
hypothetical protein
scnpilot_p_inoc_scaffold_451_3
Flavobacterium enshiense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5182..9480)
DNA (4299bp) protein (1433aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase
DNA-directed RNA polymerase subunit beta n=1 Tax=Flavobacterium enshiense DK69 RepID=V6S9Z7_9FLAO rbh
rpoC; DNA-directed RNA polymerase beta' subunit RpoC
scnpilot_p_inoc_scaffold_451_4
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9550..13362)
DNA (3813bp) protein (1271aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6RZH3_9FLAO rbh
scnpilot_p_inoc_scaffold_451_5
Flavobacterium sp. 316, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13623..13991)
DNA (369bp) protein (123aa)
50S ribosomal protein L7 n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B735DA
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=1603293 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobact
rplL; 50S ribosomal protein L7/L12
scnpilot_p_inoc_scaffold_451_6
Flavobacterium enshiense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(14055..14552)
DNA (498bp) protein (166aa)
50S ribosomal protein L10 n=1 Tax=Flavobacterium enshiense DK69 RepID=V6S9W6_9FLAO
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362}; TaxID=1107311 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacteri
rplJ; 50S ribosomal protein L10
scnpilot_p_inoc_scaffold_451_7
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(14575..15264)
DNA (690bp) protein (230aa)
50S ribosomal protein L1 n=3 Tax=Flavobacterium RepID=V6RYJ2_9FLAO rbh
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacteriu
rplA; 50S ribosomal protein L1
scnpilot_p_inoc_scaffold_451_8
Flavobacterium sp. 316, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(15283..15720)
DNA (438bp) protein (146aa)
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=1603293 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacteri
50S ribosomal protein L11 id=2678281 bin=GWF1_Flavobacteria_32_7 species=unknown genus=Myroides taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF1_Flavobacteria_32_7 organism_group=Bacteroidetes
rplK; 50S ribosomal protein L11
scnpilot_p_inoc_scaffold_451_9
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15784..16335)
DNA (552bp) protein (184aa)
Transcription antitermination protein NusG n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SMC6_9FLAO rbh
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriale
nusG; Transcription antitermination protein NusG
scnpilot_p_inoc_scaffold_451_10
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16346..16549)
DNA (204bp) protein (68aa)
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavo
Preprotein translocase subunit SecE id=4401054 bin=GWA2_Flavobacterium_35_26 species=unknown genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Flavobacterium_35_26 organism_group=Bacteroidetes organism_desc=Good+ six scaffolds
preprotein translocase subunit SecE
scnpilot_p_inoc_scaffold_451_11
Flavobacterium enshiense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16686..17873)
DNA (1188bp) protein (396aa)
Elongation factor Tu n=2 Tax=Flavobacterium RepID=V6S9W1_9FLAO rbh
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1107311 species="Bacteria; Bacteroidetes; Flavobacteriia; F
tuf; Elongation factor Tu (EF-Tu)
scnpilot_p_inoc_scaffold_451_12
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18409..18711)
DNA (303bp) protein (101aa)
Ribosome hibernation protein YhbH n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SMW5_9FLAO
Ribosome hibernation protein YhbH {ECO:0000313|EMBL:ESU27764.1}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobac
sigma 54 modulation protein/ribosomal protein S30EA
scnpilot_p_inoc_scaffold_451_13
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18732..19640)
DNA (909bp) protein (303aa)
Integrase n=1 Tax=Flavobacterium saliperosum S13 RepID=V6STM2_9FLAO rbh
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacteri
xerC; tyrosine recombinase XerC
scnpilot_p_inoc_scaffold_451_14
Flavobacterium limnosediminis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19711..19905)
DNA (195bp) protein (65aa)
30S ribosomal protein S21 n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SSY9_9FLAO
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=1341181 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavoba
rpsU; 30S ribosomal protein S21
scnpilot_p_inoc_scaffold_451_15
Flavobacterium branchiophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19992..20591)
DNA (600bp) protein (200aa)
Two-component system response regulatory protein, LuxR family n=1 Tax=Flavobacterium branchiophilum (strain FL-15) RepID=G2Z6F0_FLABF
LuxR family transcriptional regulator
Two-component system response regulatory protein, LuxR family {ECO:0000313|EMBL:CCB70972.1}; TaxID=1034807 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavob
scnpilot_p_inoc_scaffold_451_16
Flavobacterium branchiophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20607..22517)
DNA (1911bp) protein (637aa)
two component system sensor histidine kinase (EC:2.7.13.3) rbh
Two-component system sensor histidine kinase {ECO:0000313|EMBL:CCB70973.1}; EC=2.7.13.3 {ECO:0000313|EMBL:CCB70973.1};; TaxID=1034807 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales
Two-component system sensor histidine kinase n=1 Tax=Flavobacterium branchiophilum (strain FL-15) RepID=G2Z6F1_FLABF rbh
scnpilot_p_inoc_scaffold_451_17
Flavobacterium branchiophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

22640..23212
DNA (573bp) protein (191aa)
Putative uncharacterized protein n=1 Tax=Flavobacterium branchiophilum (strain FL-15) RepID=G2Z6F2_FLABF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCB70974.1}; TaxID=1034807 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium bra
scnpilot_p_inoc_scaffold_451_18
Flavobacterium branchiophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

23263..24177
DNA (915bp) protein (305aa)
Putative uncharacterized protein n=1 Tax=Flavobacterium branchiophilum (strain FL-15) RepID=G2Z0P9_FLABF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCB70975.1}; TaxID=1034807 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium bra
scnpilot_p_inoc_scaffold_451_19
Aquimarina atlantica, Aquimarina, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

24211..26385
DNA (2175bp) protein (725aa)
Uncharacterized protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JXM2_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EZH71305.1}; TaxID=1317122 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aquimarina.;" source="Aquimarina atlantica.;
subtilisin-like serine protease
scnpilot_p_inoc_scaffold_451_20
Flavobacterium subsaxonicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26475..27617)
DNA (1143bp) protein (381aa)
Acyl-CoA dehydrogenase domain-containing protein n=2 Tax=Myroides RepID=H1ZCQ6_MYROD rbh
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:KGO94362.1}; TaxID=1121898 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium subs
acyl-CoA dehydrogenase rbh
scnpilot_p_inoc_scaffold_451_21
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27634..28518)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6RZU3_9FLAO rbh
Uncharacterized protein {ECO:0000313|EMBL:ESU19547.1}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cau
hypothetical protein
scnpilot_p_inoc_scaffold_451_22
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28530..28805)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Flavobacterium enshiense DK69 RepID=V6SB34_9FLAO
PspC family transcriptional regulator {ECO:0000313|EMBL:KGO86503.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flav
hypothetical protein
scnpilot_p_inoc_scaffold_451_23
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28815..30137)
DNA (1323bp) protein (441aa)
Uncharacterized protein n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SMW8_9FLAO rbh
Uncharacterized protein {ECO:0000313|EMBL:ESU27769.1}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sal
hypothetical protein
scnpilot_p_inoc_scaffold_451_24
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

30143..31828
DNA (1686bp) protein (562aa)
Peptide-N-glycosidase F like protein n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6RZF4_9FLAO rbh
Peptide-N-glycosidase F like protein {ECO:0000313|EMBL:ESU19544.1}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavo
peptide-N-glycosidase
scnpilot_p_inoc_scaffold_451_25
GWF1_Flavobacteria_32_7_curated, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(31875..33236)
DNA (1362bp) protein (454aa)
cystathionine beta-synthase; K01697 cystathionine beta-synthase [EC:4.2.1.22] Tax=GWF1_Flavobacteria_32_7_curated
cystathionine beta-synthase
Cysteine synthase id=2678319 bin=GWF1_Flavobacteria_32_7 species=unknown genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF1_Flavobacteria_32_7 organism_group=Bacteroidetes rbh
scnpilot_p_inoc_scaffold_451_26
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(33319..35226)
DNA (1908bp) protein (636aa)
Uncharacterized protein n=1 Tax=Flavobacterium enshiense DK69 RepID=V6SB31_9FLAO rbh
Uncharacterized protein {ECO:0000313|EMBL:KGO88852.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sun
hypothetical protein
scnpilot_p_inoc_scaffold_451_27
Flavobacterium aquatile, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(35390..36412)
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Flavobacterium enshiense DK69 RepID=V6S9X6_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KGD69520.1}; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aqu
scnpilot_p_inoc_scaffold_451_28
Flavobacterium aquatile, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(36433..37215)
DNA (783bp) protein (261aa)
Uncharacterized protein {ECO:0000313|EMBL:KGD69519.1}; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aqu
scnpilot_p_inoc_scaffold_451_29
Flavobacterium aquatile, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(37230..38732)
DNA (1503bp) protein (501aa)
Uncharacterized protein n=1 Tax=Croceibacter atlanticus (strain ATCC BAA-628 / HTCC2559 / KCTC 12090) RepID=A3U7K5_CROAH rbh
Uncharacterized protein {ECO:0000313|EMBL:KGD69518.1}; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aqu
hypothetical protein
scnpilot_p_inoc_scaffold_451_30
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(38745..41858)
DNA (3114bp) protein (1038aa)
Outer membrane protein n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SME0_9FLAO rbh
Outer membrane protein {ECO:0000313|EMBL:ESU27776.1}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sali
outer membrane protein
Displaying items 1-30 of 65 in total

View Taxonomy