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scnpilot_p_inoc_scaffold_605

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_605_1
Riemerella anatipestifer, Riemerella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

207..434
DNA (228bp) protein (76aa)
Helix-turn-helix domain protein n=4 Tax=Riemerella anatipestifer RepID=E4TA84_RIEAD
helix-turn-helix domain-containing protein
Helix-turn-helix domain protein {ECO:0000313|EMBL:AFD56247.1}; TaxID=693978 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Riemerella.;" source="Riemerella anat
scnpilot_p_inoc_scaffold_605_2
unknown

Not on your lists

749..1399
DNA (651bp) protein (217aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_605_3
Tamlana nanhaiensis, Tamlana, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

1472..2353
DNA (882bp) protein (294aa)
hypothetical protein n=1 Tax=Flavobacterium sp. SCGC AAA160-P02 RepID=UPI00037C5A22
Uncharacterized protein {ECO:0000313|EMBL:KJD31362.1}; TaxID=1382798 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Tamlana.;" source="Tamlana nanhaiensis.;"
scnpilot_p_inoc_scaffold_605_4
unknown

Not on your lists

2398..2664
DNA (267bp) protein (89aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_605_5
Flavobacterium reichenbachii, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2698..3873)
DNA (1176bp) protein (392aa)
Proline dehydrogenase n=1 Tax=Flavobacterium sp. F52 RepID=J1ABE9_9FLAO rbh
Proline dehydrogenase {ECO:0000313|EMBL:KFF04640.1}; TaxID=362418 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium reiche
proline dehydrogenase
scnpilot_p_inoc_scaffold_605_6
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3971..5038
DNA (1068bp) protein (356aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=1121899 species="Bacteri
3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase n=1 Tax=Flavobacterium enshiense DK69 RepID=V6SKL5_9FLAO rbh
scnpilot_p_inoc_scaffold_605_7
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

5341..6747
DNA (1407bp) protein (469aa)
Arginine decarboxylase {ECO:0000256|SAAS:SAAS00212226}; EC=4.1.1.19 {ECO:0000256|SAAS:SAAS00212226};; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriacea
Arginine decarboxylase, biosynthetic n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FV62_9FLAO rbh
Orn/DAP/Arg decarboxylase 2
scnpilot_p_inoc_scaffold_605_8
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

6809..7780
DNA (972bp) protein (324aa)
Deoxyhypusine synthase {ECO:0000313|EMBL:KGO83426.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beib
Deoxyhypusine synthase id=4975014 bin=GWA2_Flavobacterium_35_26 species=unknown genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Flavobacterium_35_26 organism_group=Bacteroidetes organism_desc=Good+ six scaffolds rbh
hypothetical protein
scnpilot_p_inoc_scaffold_605_9
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

7880..8317
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SFU8_9FLAO
Primase {ECO:0000313|EMBL:KGO90043.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5
hypothetical protein
scnpilot_p_inoc_scaffold_605_10
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

8444..9313
DNA (870bp) protein (290aa)
Tetratricopeptide repeat protein n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6RXF0_9FLAO rbh
Tetratricopeptide repeat protein {ECO:0000313|EMBL:ESU18707.1}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobact
hypothetical protein
scnpilot_p_inoc_scaffold_605_11
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9390..11417)
DNA (2028bp) protein (676aa)
Uncharacterized protein n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SGT2_9FLAO rbh
Uncharacterized protein {ECO:0000313|EMBL:ESU25477.1}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sal
hypothetical protein
scnpilot_p_inoc_scaffold_605_12
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11477..12223)
DNA (747bp) protein (249aa)
3-oxoacyl-ACP reductase (EC:1.1.1.100)
3-oxoacyl-ACP reductase n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SFX0_9FLAO rbh
3-ketoacyl-ACP reductase {ECO:0000313|EMBL:KGO90022.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium su
scnpilot_p_inoc_scaffold_605_13
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12299..13621)
DNA (1323bp) protein (441aa)
Methionine transporter MetT n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FV09_9FLAO rbh
Methionine transporter MetT {ECO:0000313|EMBL:EIA07571.1}; TaxID=1086011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium
sodium:proton antiporter
scnpilot_p_inoc_scaffold_605_14
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

13907..14461
DNA (555bp) protein (185aa)
Crp/Fnr family transcriptional regulator n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B4A82E
cAMP-binding protein {ECO:0000313|EMBL:KGL64230.1}; TaxID=1250005 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. Hel1_8
cyclic nucleotide-binding protein
scnpilot_p_inoc_scaffold_605_15
Muricauda ruestringensis, Muricauda, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

14519..15079
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Muricauda ruestringensis (strain DSM 13258 / LMG 19739 / B1) RepID=G2PL33_MURRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEM71062.1}; TaxID=886377 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Muricauda.;" source="Muricauda ruestringensis
scnpilot_p_inoc_scaffold_605_16
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15132..16004)
DNA (873bp) protein (291aa)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacte
sucD; succinyl-CoA synthetase subunit alpha (EC:6.2.1.5)
succinyl-CoA synthetase subsunit alpha n=1 Tax=Flavobacterium rivuli RepID=UPI000372C267 rbh
scnpilot_p_inoc_scaffold_605_17
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16117..16479)
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Flavobacterium sp. ACAM 123 RepID=UPI00031360A5
Uncharacterized protein {ECO:0000313|EMBL:KGO83641.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium bei
hypothetical protein
scnpilot_p_inoc_scaffold_605_18
GWF1_Flavobacteria_32_7_curated, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16469..17410)
DNA (942bp) protein (314aa)
UDP-N-acetylglucosamine acyltransferase; K02536 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] Tax=GWF1_Flavobacteria_32_7_curated
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase id=2873719 bin=GWF1_Flavobacteria_32_7 species=Flavobacteria bacterium BAL38 genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF1_Flavobacteria_32_7 organism_group=Bacteroidetes rbh
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase
scnpilot_p_inoc_scaffold_605_19
Flavobacterium enshiense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17475..18041)
DNA (567bp) protein (189aa)
Elongation factor P n=1 Tax=Flavobacterium enshiense DK69 RepID=V6SEB5_9FLAO rbh
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=1107311 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriacea
elongation factor P
scnpilot_p_inoc_scaffold_605_20
Flavobacterium rivuli, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18081..18866)
DNA (786bp) protein (262aa)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase {ECO:0000256|SAAS:SAAS00064156}; EC=2.3.1.129 {ECO:0000256|SAAS:SAAS00001267};; TaxID=1121895 species="Bacteria; Bacteroidetes; F
lpxA; Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (EC:2.3.1.129)
UDP-N-acetylglucosamine acyltransferase n=1 Tax=Flavobacterium rivuli RepID=UPI00036389DC rbh
scnpilot_p_inoc_scaffold_605_21
Flavobacterium limnosediminis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18878..20266)
DNA (1389bp) protein (463aa)
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase {ECO:0000256|SAAS:SAAS00041388}; EC=3.5.1.- {ECO:0000256|SAAS:SAAS00041386};; EC=4.2.1.59 {ECO:0000256|SAAS:SAAS00064862};; 3-hydroxyacyl-[
UDP-3-O-acyl-N-acetylglucosamine deacetylase n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SLS9_9FLAO rbh
bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-ACP dehydratase
scnpilot_p_inoc_scaffold_605_22
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20296..21312)
DNA (1017bp) protein (339aa)
UDP-3-O-acylglucosamine N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00523}; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_00523};; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteri
lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC:2.3.1.-)
UDP-3-O-(3-hydroxymyristoyl)-glucosamine N-acyltransferase n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6S384_9FLAO rbh
scnpilot_p_inoc_scaffold_605_23
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21343..22578)
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6RWI9_9FLAO rbh
Uncharacterized protein {ECO:0000313|EMBL:ESU25464.1}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sal
metal dependent phosphohydrolase
scnpilot_p_inoc_scaffold_605_24
GWF1_Flavobacteria_32_7_curated, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

22858..23988
DNA (1131bp) protein (377aa)
Uncharacterized protein id=2720384 bin=GWF1_Flavobacteria_32_7 species=Flavobacterium indicum genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF1_Flavobacteria_32_7 organism_group=Bacteroidetes
hypothetical protein Tax=GWF1_Flavobacteria_32_7_curated
hypothetical protein
scnpilot_p_inoc_scaffold_605_25
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

24345..24983
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Myroides odoratimimus CCUG 12700 RepID=S3XN59_9FLAO
Bacteriophage CI repressor helix-turn-helix domain
Uncharacterized protein {ECO:0000313|EMBL:KGO87664.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sun
scnpilot_p_inoc_scaffold_605_26
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25041..26978)
DNA (1938bp) protein (646aa)
OmpA/MotB domain protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FE71_FLAJ1 rbh
Flagellar motor protein MotB {ECO:0000313|EMBL:KGO90548.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacteriu
OmpA/MotB domain-containing protein
scnpilot_p_inoc_scaffold_605_27
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26991..27923)
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BHJ7_ZUNPS rbh
Membrane protein {ECO:0000313|EMBL:KGO90547.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonen
hypothetical protein
scnpilot_p_inoc_scaffold_605_28
Flavobacterium hibernum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27973..35781)
DNA (7809bp) protein (2603aa)
Conserved repeat domain protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FE73_FLAJ1 rbh
Strain DSM 12611 Contig12, whole genome shotgun sequence {ECO:0000313|EMBL:KIO51914.1}; TaxID=37752 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacteriu
hypothetical protein rbh
scnpilot_p_inoc_scaffold_605_29
unknown

Not on your lists

36107..36421
DNA (315bp) protein (105aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_605_30
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

36426..37184
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6RVS1_9FLAO rbh
Uncharacterized protein {ECO:0000313|EMBL:ESU18613.1}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cau
hypothetical protein
Displaying items 1-30 of 47 in total

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