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scnpilot_p_inoc_scaffold_4_85

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 103141..105744

Top 3 Functional Annotations

Value Algorithm Source
Superfamily II RNA helicase n=1 Tax=Novosphingobium sp. AP12 RepID=J2ZXK0_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 65.5
  • Coverage: 851.0
  • Bit_score: 1084
  • Evalue 0.0
  • rbh
Superfamily II RNA helicase {ECO:0000313|EMBL:EJL23439.1}; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosph similarity UNIPROT
DB: UniProtKB
  • Identity: 65.5
  • Coverage: 851.0
  • Bit_score: 1084
  • Evalue 0.0
ATP-dependent helicase similarity KEGG
DB: KEGG
  • Identity: 64.3
  • Coverage: 852.0
  • Bit_score: 1067
  • Evalue 0.0

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Taxonomy

Novosphingobium sp. AP12 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2604
ATGGTTCACACCCCCAACCTGCGCGCTTCGTTTCGCCCGCAACAATCCCACGATGGCCGGGTAAAGGCCGTGCTTGGCCCCACCAACACCGGCAAGACCCATCTGGCCATCGAGCGGCTCTGCGCCCATTCCTCGGGCGCCATCGGCTTTCCGCTGCGGCTGCTGGCGCGTGAGGTTTACGAGAAGGTCTGCGCGATCAAAGGCGCGGAGCATGTCGCGCTGATCACCGGCGAGGAGCGGATCGAGCCGCCCAATGCGCGCTGGCTGCTGTGTACGGTTGAGGCGATGCCGGTAAGGGGGCCGGTGCGCGGCGCGCCCAAAAAGGGCGCGAATACCCGCTTCACCGACCTGTCCTTTGTCGCCATCGACGAAATTCAACTCTGCGGTGATCGGGATCGCGGTCATATTTTCACTGACCGCCTTCTGCATGCGCGCGGGCGCGATGAGACGATGCTGCTCGGCTCCTCGGTGATGGAGCCGCTGGTCAAGTCTCTCGTACCCGAGGCCGAGATCGTCAGCCGCCCGCGCTTTTCCACGCTCAGCCACTCGGGCGCGAAGAAACTGTCGCGCGTGCCGCCGCGCAGCGCCATCGTCGCGTTCAGCGCCGAGCAGGTCTATGCCGTGGCCGAAATGCTGCGCCGGTTTCGCGGCGGCGCGGCGGTGGTGATGGGCGCGCTTTCCCCCGAAACCCGCAACCGTCAAGTCGAACTCTATCAATCGGGCGAGGTCGATTATCTGGTGGCCACCGATGCCATCGGCATGGGGTTGAACCTTGATATCACCCATGTGGCTTTCGCCGGGCTGTCGAAATATGACGGGGTGCGCCAGCGCCGCCTGCTGCCCACCGAAATGGCGCAGATCGCCGGGCGCGCCGGGCGGCATCAGCGCGATGGGACCTTTGGCACGCTGGCCGGAACCGGGGGCCATGACGCGGAATTTTCCGATGAGGAAATCTATGCGATCGAGGAACACCGCTTCGCCCCGCTGACCCGCCTGTTCTGGCGCGAATCCGATCTCAGCTTTGATTCGGTAGCGCGGCTGATCGATTCGCTCGAACGGCCCCCGGCCAAGGCCGAACTGATCGCAGCGCCCCAAGCTATCGATCTGGCCGTGCTCAAGCGCCTGGCCGAAGACCCCGATATTGCCCCCGGCGTGCGCGGCACCGGTATGGTGCGCCGTTTCTGGGAAGCCTGCTCGCTGCCCGATTTTCGCCAGCAGGGAGCCGAAACCCACGCCCGTTTCATCGCCCGCCTGTGGGAGGAATTGCGCCACGGGCCGCTGGCCGCCGACACTGCCCCGCGCGCCATTGCCCAGCTCGACAACACGCAGGGCGATATCGACACGTTGCAGGGCCGGATCGCGGCGGTGCGTTCGTGGTCCTATATCTGCCAGCGGCCCGATTGGGTGCTGGCGCGCGATGAAATGGCGGCCCGCGCGCGTGAGGTGGAATCGCGCCTGTCCGATGCCTTGCACGCCCGCCTGACCGAGCGTTTCGTCAACCGGCGCACCACCGTTCTGATGCGCAAGCTGGGGCCGGACGCAGGCCTGCTGTCGGTCGCGATGGAGGGCGATGATGTGCTGGTCGAGGGCGAGAAGATCGGCACGCTGAGCGGCTTTGCCTTTCGCGTCGATCCTTCGGCGCGGCACGAGGATGCGCGGCTGCTTCAGGCGGCGGCGGAGAAGCATTTGCCCGACCTGCTGGCCCGGCGCGCGGGCGAATTGATCGCGGCGCTGAATGCGGGCGAGGCCGATGTGGAGATGCAAGGCGAGAGCATCGTCTGGCATGGCCATCCTCTTGCCCGGATCGCGCGGGGGCGGGCGCTGCTCACCCCTACGCTGACGGCTGTGCCTTTGCTCGACCGGCTTGCCGCGCCCTTGCGCGCCGATCTGATCGCGGCGCTGGGGCAATGGCTGGCGCGGCGGTGGAAACCGCTTGCCCCGCTGGCGGCAATGGAGGCGGCCAGCCTTGATCCCGACAGCGGATCGGATCTGCGCGCGCTGCTCATCCGCATGATTGAGGGGGGCGGGATGGTTGATCGCGCCGCCTCGGGGGTGGAAAAGCTTTCTCCGCCCCAGCGCGATGTGCTGCGCAGGCTGGGGGTGCGGATCGGGCCGCTCGATGTGTTTCACCCCGCGATGGTCAAGGCCGCGCCGCTGCAATTATGGCAATCGGCGGTGGGCGCAAAGGGCATCATCGCCCAGCCGATGGCCCCGGTGGTCAAGCTGAGCGACAAGCCTGTGCCGCGCTTCTATCGCCGCTTGGGCCAGGAGGCGCTGCGCATCGACCGGGCCGACCGGCTGCTGCGCGAGGCCCATGCGCGGCGCAAGGCGGCGAGCGGAAAAACCGGCAAGACGGCCTTCTCGCTCGATCCGGGTGAGGCGGTGAAAATCGGCCTCTCGACGCGGGCCTATGCCCATCTGCTGCGGCTGGGCGGATTTCGCCCGATCATGCCGCGCGTGCTGCCGGCCGAGGTCTATGGTCCACCCGCCCCGCTGGTCTGGCGCTGGCATCCTCCCCGGCGTGAGACCGAGGCATCCACCCGTCAGCAGGCCGCGATGGACGTCGACAGCCCCTTTGCCGCTCTGGCCTCGCTGGTGGCCTGA
PROTEIN sequence
Length: 868
MVHTPNLRASFRPQQSHDGRVKAVLGPTNTGKTHLAIERLCAHSSGAIGFPLRLLAREVYEKVCAIKGAEHVALITGEERIEPPNARWLLCTVEAMPVRGPVRGAPKKGANTRFTDLSFVAIDEIQLCGDRDRGHIFTDRLLHARGRDETMLLGSSVMEPLVKSLVPEAEIVSRPRFSTLSHSGAKKLSRVPPRSAIVAFSAEQVYAVAEMLRRFRGGAAVVMGALSPETRNRQVELYQSGEVDYLVATDAIGMGLNLDITHVAFAGLSKYDGVRQRRLLPTEMAQIAGRAGRHQRDGTFGTLAGTGGHDAEFSDEEIYAIEEHRFAPLTRLFWRESDLSFDSVARLIDSLERPPAKAELIAAPQAIDLAVLKRLAEDPDIAPGVRGTGMVRRFWEACSLPDFRQQGAETHARFIARLWEELRHGPLAADTAPRAIAQLDNTQGDIDTLQGRIAAVRSWSYICQRPDWVLARDEMAARAREVESRLSDALHARLTERFVNRRTTVLMRKLGPDAGLLSVAMEGDDVLVEGEKIGTLSGFAFRVDPSARHEDARLLQAAAEKHLPDLLARRAGELIAALNAGEADVEMQGESIVWHGHPLARIARGRALLTPTLTAVPLLDRLAAPLRADLIAALGQWLARRWKPLAPLAAMEAASLDPDSGSDLRALLIRMIEGGGMVDRAASGVEKLSPPQRDVLRRLGVRIGPLDVFHPAMVKAAPLQLWQSAVGAKGIIAQPMAPVVKLSDKPVPRFYRRLGQEALRIDRADRLLREAHARRKAASGKTGKTAFSLDPGEAVKIGLSTRAYAHLLRLGGFRPIMPRVLPAEVYGPPAPLVWRWHPPRRETEASTRQQAAMDVDSPFAALASLVA*