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scnpilot_p_inoc_scaffold_4_86

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 105744..106058

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B4D591 similarity UNIREF
DB: UNIREF100
  • Identity: 60.6
  • Coverage: 94.0
  • Bit_score: 119
  • Evalue 2.00e-24
Ribosome-associated heat shock protein {ECO:0000313|EMBL:GAO54376.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sour similarity UNIPROT
DB: UniProtKB
  • Identity: 61.1
  • Coverage: 90.0
  • Bit_score: 125
  • Evalue 3.80e-26
RNA-binding S4 similarity KEGG
DB: KEGG
  • Identity: 62.2
  • Coverage: 90.0
  • Bit_score: 115
  • Evalue 8.00e-24

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 315
ATGCGGATCGACAAGCTCCTCTGGTTTCTGCGGCTGGTCAAAACCCGGGGCGCGGCGCAGGAATGGGTCGAGGCGGGCCATATCCGCCGCAACGGCACGCGCATCGAACGCTGTTCGGCCTCGGTCGCGGTGGGCGATGTGCTGGTGCTGCCGGTGCCTTCGGGGGTGCGGATCATCCGGTTGATCGCCATGCCAAACCGGCGCGGACCGCCAAATGAAGCACAAAGCTGTTATGAGGCGCTTGACGAGACCGCCCCTTCCCCACTAGCAGCGGGGAAAGTTTGTTCTTCATTGAAAGGGGATTTGCAGCCATGA
PROTEIN sequence
Length: 105
MRIDKLLWFLRLVKTRGAAQEWVEAGHIRRNGTRIERCSASVAVGDVLVLPVPSGVRIIRLIAMPNRRGPPNEAQSCYEALDETAPSPLAAGKVCSSLKGDLQP*