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scnpilot_p_inoc_scaffold_4_104

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(126237..126557)

Top 3 Functional Annotations

Value Algorithm Source
Integrase, catalytic region n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GTQ6_SPHAL similarity UNIREF
DB: UNIREF100
  • Identity: 90.5
  • Coverage: 105.0
  • Bit_score: 198
  • Evalue 2.60e-48
integrase catalytic subunit similarity KEGG
DB: KEGG
  • Identity: 91.4
  • Coverage: 105.0
  • Bit_score: 200
  • Evalue 3.30e-49
Integrase, catalytic region {ECO:0000313|EMBL:ABF52966.1}; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxi similarity UNIPROT
DB: UniProtKB
  • Identity: 91.4
  • Coverage: 105.0
  • Bit_score: 200
  • Evalue 1.60e-48

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Taxonomy

Sphingopyxis alaskensis → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 321
GTGGCGGCCTTTACGCGGGACTGGAAGCGTGAGCGCCAGTATGAGCAGCAGACCAGCGGGCGCAGAACATTCGTGCCGCTGGCCTTCCAGCCTGGTGAAGCCTTCCAGTTCGATTGGAGCGAGGATTACGCTGTTCTGGGCGGCAAGCCGGTCAAGTTGCAGGTGGCCCACACCAAGTTTTCGCATAGCCGCGCTTTCATCGTGCGAGCCTACCTGCTGCAGACGCACGAGATGTTGTTTGACGCCCTGACGCAGGCATTCCGGGTACTGGGCGATGTGCCGCAACGCGGGATCTTTGATAATATGAAGACAGCGCCTTGA
PROTEIN sequence
Length: 107
VAAFTRDWKRERQYEQQTSGRRTFVPLAFQPGEAFQFDWSEDYAVLGGKPVKLQVAHTKFSHSRAFIVRAYLLQTHEMLFDALTQAFRVLGDVPQRGIFDNMKTAP*