ggKbase home page

scnpilot_p_inoc_scaffold_4_105

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(127369..128016)

Top 3 Functional Annotations

Value Algorithm Source
Putative capsule polysaccharide export ATP-binding protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IP50_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 68.2
  • Coverage: 214.0
  • Bit_score: 300
  • Evalue 9.80e-79
putative capsule polysaccharide export ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 68.2
  • Coverage: 214.0
  • Bit_score: 300
  • Evalue 2.80e-79
Putative capsule polysaccharide export ATP-binding protein {ECO:0000313|EMBL:BAK65689.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphi similarity UNIPROT
DB: UniProtKB
  • Identity: 68.2
  • Coverage: 214.0
  • Bit_score: 300
  • Evalue 1.40e-78

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingobium sp. SYK-6 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 648
ATGATCGTCTGCGAAAATCTCTCAAAGTCGTATCGTGTTGGCCACGGGCGCAAGCATGTCCTGTGCGATGTTAATTTGCAAATCAGCAAATCGGACAAGATTGCGTTTTTGGGGCGCAACGGAGCGGGAAAGTCCACGCTGATCCGTCTTTTGGGCGGGGTGGAAATGCCCACTTCGGGCATCATCCGCCGCTCGATGTCGGTGTCCTGGCCGCTGGGCTTCAACGGTGGCTTTCAGGGTAGCCTGACCGGCTATGACAATGCCCGCTTCATCGCGCGCATTTACAACAAGCCCTACCAGTATGTGCGCGAGTTTGTTGAAGAGTTCACTGAATTGGGCCGCCAGTTGGCGATGCCGGTCAAGACCTATTCCTCAGGGATGCGGGCGAGGCTGGCGTTTGCTCTCTCGCTGGCCATCGAGTTTGATTGCTATCTGATCGACGAGATCATCCTGGTTGGCGATGCCCAGTTCCGCGCCAAGTGCCAGTACGAACTGTTCGACAAGCGCGGCGATCGTGGTTTTGTGCTGGCATCCCATGACATGGGTATCATTCGCGAATTCTGCAACCGCGCCGTGATCGTGGGCGGGCAGAACGCCATCGTCACCGACGACGTCGAAGGGGCTGTTGCCCATTACGAGAGAAGCTGA
PROTEIN sequence
Length: 216
MIVCENLSKSYRVGHGRKHVLCDVNLQISKSDKIAFLGRNGAGKSTLIRLLGGVEMPTSGIIRRSMSVSWPLGFNGGFQGSLTGYDNARFIARIYNKPYQYVREFVEEFTELGRQLAMPVKTYSSGMRARLAFALSLAIEFDCYLIDEIILVGDAQFRAKCQYELFDKRGDRGFVLASHDMGIIREFCNRAVIVGGQNAIVTDDVEGAVAHYERS*