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scnpilot_p_inoc_scaffold_4_279

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(303956..304885)

Top 3 Functional Annotations

Value Algorithm Source
GDP-L-fucose synthase {ECO:0000256|HAMAP-Rule:MF_00956}; EC=1.1.1.271 {ECO:0000256|HAMAP-Rule:MF_00956};; GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase {ECO:0000256|HAMAP-Rule:MF_00956}; TaxI similarity UNIPROT
DB: UniProtKB
  • Identity: 74.4
  • Coverage: 305.0
  • Bit_score: 474
  • Evalue 1.30e-130
GDP-L-fucose synthase n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002FAD69B similarity UNIREF
DB: UNIREF100
  • Identity: 71.2
  • Coverage: 306.0
  • Bit_score: 458
  • Evalue 6.90e-126
  • rbh
GDP-L-fucose synthase (GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase) similarity KEGG
DB: KEGG
  • Identity: 70.4
  • Coverage: 307.0
  • Bit_score: 455
  • Evalue 1.30e-125

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Taxonomy

Hyphomonas sp. CY54-11-8 → Hyphomonas → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 930
ATGTTCGATCTTTCCGGTAAGCGTGTCTTTGTCGCAGGCCATCGTGGTATGGTGGGCAGCGCCATTGTGCGCCGCCTTGCTTCGGAAAATTGCGATGTGCTGACCGCCGGCCGCGCCGAGCTTGATCTGATGGATCAAGCTGCCGTGCGCGGCTGGATGGCTCGGGAAAAGCCCGATGTGGTAGTGGTTGCCGCAGCCAAGGTGGGGGGCATTCTGGCCAACAACACCTATCCGGCCGACTTCCTCTATAACAATCTGATGATCGAGGCGAACCTCATTCAGGCCTCCCACGCCGTGGACGTGGGCAAGCTGCTGTTTCTGGGTTCGTCCTGCATCTATCCCAAATTCGCCCCTCAGCCGATCACCGAGGACGCGTTGCTCACCGGCCCGTTGGAAGAAACCAACGAATGGTACGCGATTGCCAAGATCGCCGGGATCAAGCTGTGCGAGGCCTATCGCGTGCAGCATGGCGTTGACTACATCAGCGGCATGCCCACCAATCTTTACGGCCCGGGCGACAATTACAACCTCGAAACCAGCCATGTGATGCCCGCGCTGATCCGCAAGGTGCACAATGCCAAGAAGATTGGCGGCACGGTGGAGGTGTGGGGCACGGGCACCCCGCGCCGCGAATTCATGCATGCCGATGATTGCGCCGATGCCTGTGTGCATCTGCTCAAGAACTATTCCGGCCGCGAACATGTTAACATCGGCTTCGGCTCGGATGTCTCGATCCTCGAACTGACCCAGCTCGTGATGGAAGTCGTCGGCTATGAAGGCGAGATCGTCCATGATCTGTCCAAGCCCGATGGCACCCCGCGCAAGCTGATGGACTCCGCACGCCTTCATGCGCTTGGCTGGACCCCGCGGATCGCGCTCAAAGAAGGCATTGCTGACGCCTACCGTCACTTCCTGACAGAGGTAGGTTAA
PROTEIN sequence
Length: 310
MFDLSGKRVFVAGHRGMVGSAIVRRLASENCDVLTAGRAELDLMDQAAVRGWMAREKPDVVVVAAAKVGGILANNTYPADFLYNNLMIEANLIQASHAVDVGKLLFLGSSCIYPKFAPQPITEDALLTGPLEETNEWYAIAKIAGIKLCEAYRVQHGVDYISGMPTNLYGPGDNYNLETSHVMPALIRKVHNAKKIGGTVEVWGTGTPRREFMHADDCADACVHLLKNYSGREHVNIGFGSDVSILELTQLVMEVVGYEGEIVHDLSKPDGTPRKLMDSARLHALGWTPRIALKEGIADAYRHFLTEVG*