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scnpilot_p_inoc_scaffold_4_280

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(304897..305241)

Top 3 Functional Annotations

Value Algorithm Source
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=1572751 species="Bacte similarity UNIPROT
DB: UniProtKB
  • Identity: 78.6
  • Coverage: 112.0
  • Bit_score: 191
  • Evalue 8.10e-46
GDP-mannose 4,6-dehydratase n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B46B53 similarity UNIREF
DB: UNIREF100
  • Identity: 77.7
  • Coverage: 112.0
  • Bit_score: 181
  • Evalue 3.50e-43
GDP-mannose 4,6-dehydratase similarity KEGG
DB: KEGG
  • Identity: 66.1
  • Coverage: 112.0
  • Bit_score: 163
  • Evalue 2.80e-38

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Taxonomy

Kirrobacter mercurialis → Kirrobacter → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 345
ATGCTTCAGCAGGAGCAGGGCGACGATTACGTGCTGGCGACCGGCGAAACCGTCGAAGTGCGCAATTTCGTGCGCTGGGCCTTTGAAGACGTGGGCATCGAGCTGGAATTCACCGGCGAAGGCATCGACGAAAAGGGTATCTGCAAGAAGACCGGCAAGGTCATTGTCGAGATCGACCCGCGCTACTTCCGCCCGACCGAGGTGGACCTGCTGATCGGCGATCCGACCAAGGCCAAGGAAAAGCTGGGCTGGAGCCACAAGACCCCGATCCGCGAGCTGGCCCGTGAAATGGTCCAGGCCGACCTTCAGGTCATGCGCGACGCCCCGATCGCCAAGTTCCAGTAA
PROTEIN sequence
Length: 115
MLQQEQGDDYVLATGETVEVRNFVRWAFEDVGIELEFTGEGIDEKGICKKTGKVIVEIDPRYFRPTEVDLLIGDPTKAKEKLGWSHKTPIRELAREMVQADLQVMRDAPIAKFQ*