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scnpilot_p_inoc_scaffold_4_524

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(586466..587182)

Top 3 Functional Annotations

Value Algorithm Source
ATP-binding protein n=1 Tax=Sphingobium sp. YL23 RepID=UPI0003AAAC31 similarity UNIREF
DB: UNIREF100
  • Identity: 67.4
  • Coverage: 227.0
  • Bit_score: 304
  • Evalue 7.50e-80
  • rbh
Lipoprotein releasing system ATP-binding protein lolD {ECO:0000313|EMBL:GAO56153.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphi similarity UNIPROT
DB: UniProtKB
  • Identity: 77.0
  • Coverage: 235.0
  • Bit_score: 353
  • Evalue 2.00e-94
ABC-type transport system ATPase component similarity KEGG
DB: KEGG
  • Identity: 66.7
  • Coverage: 222.0
  • Bit_score: 302
  • Evalue 1.10e-79

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 717
ATGGTCGCTCCGGTTCTGCCAGAGCCGGTTCTTGTCGCGCGCCATCTGCGGCGCGAGCTGGACGGCGATCCGCCGCCCGTGCTGGTGGCGGACGCGGATCTGGCGGTGATGCCGGGGCGCTTTACCGCGATTGTCGGGCCTTCGGGCTGCGGCAAATCCTCGCTGCTCTATCTGCTGGGCCTGATCGACCGGCCGACGGGGGGGCAATTGCTGTTTGACGGGCGCGATCTGGCGCAGATGTCGGGGGATGAGCGCGCGGCGATCCGGCTCGAACATTTCGGTTTCGTGTTTCAGTTCCATTTCCTGCTGCCCGAATTTACCGCGCTGGAAAATGTCATGCTTCCGCTGCGCCGCCTCGGCCGCCTCTCGGCGCGCGAGGTCGAGGCGCGGGCGACCAGCCTGCTGGCCGATGTGGGCCTCGCGGAAAAGGGGTGGAAATTGCCCGAAAAGCTCTCGGGCGGCGAAAGACAGCGCGTGGCCATCGCCCGCGCCCTGGCCAACAATCCGCGCCTTGTGCTGGGCGATGAACCGACCGGCAATCTGGACAGCGTCAATTCGGCCCGCGTGGTCGAACTGTTCCGCGCGCTGGCCCATGAACAGGGGCGCGCGGTGGTCTGCGTGACGCATGACATGGGCATTGCCGATCTGGCCGACATTCGCGTCTCCATGCTGGACGGGCGCGTGATCGAGGTGAGGGAACAAAACCCGCCCTCGTGA
PROTEIN sequence
Length: 239
MVAPVLPEPVLVARHLRRELDGDPPPVLVADADLAVMPGRFTAIVGPSGCGKSSLLYLLGLIDRPTGGQLLFDGRDLAQMSGDERAAIRLEHFGFVFQFHFLLPEFTALENVMLPLRRLGRLSAREVEARATSLLADVGLAEKGWKLPEKLSGGERQRVAIARALANNPRLVLGDEPTGNLDSVNSARVVELFRALAHEQGRAVVCVTHDMGIADLADIRVSMLDGRVIEVREQNPPS*