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scnpilot_p_inoc_scaffold_4_525

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(587182..588432)

Top 3 Functional Annotations

Value Algorithm Source
Lipoprotein-releasing system permease protein n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IDW8_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 72.8
  • Coverage: 416.0
  • Bit_score: 608
  • Evalue 5.50e-171
  • rbh
Lipoprotein releasing system transmembrane protein lolC {ECO:0000313|EMBL:GAO56154.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosp similarity UNIPROT
DB: UniProtKB
  • Identity: 81.5
  • Coverage: 416.0
  • Bit_score: 663
  • Evalue 2.70e-187
lipoprotein-releasing system permease similarity KEGG
DB: KEGG
  • Identity: 72.8
  • Coverage: 416.0
  • Bit_score: 608
  • Evalue 1.60e-171

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1251
ATGCTGGCGCGCTTTTCCCTGCTGGTCCATATTGCCTCGCGCCATCTGATCGTGCGGCGGCGGCAAACGCTGGTGGCCACCAGCGGGGTCGCGGTGGGGGTGGGTTTTTTTCTGGCCGTGTCCGCGCTGATGGTGGGCAGCCAGAATGATTTCGTGCGGCAATTGATCGATGTCGCGCCCCACATCATCATCTCCGACGAATTGCGCAGCCCCCCGCCCCAGCCCGGCATTGCCGCCTATCCCGGCGGCGCGGTCCAGCTTCACGGCTATCGCATCCGCAATGAGGTGCGCGGATTGAAGGACTGGCAGCGGATTCTGGCCAGCGTCAATGCCATCCCCGGCGCGATCGGTTCGCCCAGCCTGTCGGGCGCGGTCACGCTGCGGCTGGGCGGGCGGGACGAGCCGCTGGCCATTGTCGGCATCGAGCCGGGGCTGGAGGCCAGGGTCAGTTCGATCAGCGACAAATTGCGCGCCGGGCATCTGGACGATCTGGAACGGGTGCAGGGCGGGGTTATCCTCGGCGAGGAGCTGGCGCAAAGGCTGGGGCGGGGCATGGGCGATATCGTGCCCGCCACCGCCGCCAACGGCACCACGCGGTCGCTGCGCATCGTTGCGCTGGTCAAAAAGGGCAACAGCCAGCTTGGCTCCTCCTCAGGCTACATGCTGCTGCGTGAGGCGCAGAGCCTGCTGGGGCGGCCCTTCATCATCAACCGGATCGGGGTGAAACTGAGCGATCCCTATGCCGCCGAGACAGTCGCGGCGGGGCTGGAGGCGCGCTATCGCTATAAGGCGCAGAGCTGGCAGGAGCGCAGCGCCGATTTCCTGTCCTTGCTGCTGACGCGCAATGTCATCATGTATACGGTGGTTTCGGCCATCCTGCTGGTGGCGAGTTTCGGCATCTACACCGCCGTATCGAACAGCGTGGCCGACAAGCGGCGCGACATTGCCATCCTGCGCTCGATGGGCTTTTCGCAGGGCGATCTGCAGATGGTCTTTGTGCTGGAGGGTATGGCGCTGGCGGTGATCGGGATTTTGCTGGGCTGGGCGCTTGGCTTTGGCCTGATGACCATTCTGGGCAGCCTTGAATTTCCCATCGGGGGCGAGATCCAGCACATGCCGCTCGACCGTTCGCCGCGCCAATATGCGATTGCGGCGGCGGCCTCGCTGGCGGCGGGCGTGCTGGCGGCGTGGCTGCCCGCACGCAAGGCCTCGCGGGTCGATCCGGTCGATATTCTGCGGGGGGCGGTCTAA
PROTEIN sequence
Length: 417
MLARFSLLVHIASRHLIVRRRQTLVATSGVAVGVGFFLAVSALMVGSQNDFVRQLIDVAPHIIISDELRSPPPQPGIAAYPGGAVQLHGYRIRNEVRGLKDWQRILASVNAIPGAIGSPSLSGAVTLRLGGRDEPLAIVGIEPGLEARVSSISDKLRAGHLDDLERVQGGVILGEELAQRLGRGMGDIVPATAANGTTRSLRIVALVKKGNSQLGSSSGYMLLREAQSLLGRPFIINRIGVKLSDPYAAETVAAGLEARYRYKAQSWQERSADFLSLLLTRNVIMYTVVSAILLVASFGIYTAVSNSVADKRRDIAILRSMGFSQGDLQMVFVLEGMALAVIGILLGWALGFGLMTILGSLEFPIGGEIQHMPLDRSPRQYAIAAAASLAAGVLAAWLPARKASRVDPVDILRGAV*