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scnpilot_p_inoc_scaffold_59_189

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(181927..183246)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9WEI4_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 70.0
  • Coverage: 446.0
  • Bit_score: 594
  • Evalue 8.70e-167
  • rbh
Ribosomal large subunit pseudouridine synthase C {ECO:0000313|EMBL:EIZ78613.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobiu similarity UNIPROT
DB: UniProtKB
  • Identity: 70.0
  • Coverage: 446.0
  • Bit_score: 594
  • Evalue 1.20e-166
pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 67.7
  • Coverage: 424.0
  • Bit_score: 579
  • Evalue 6.30e-163

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Taxonomy

Novosphingobium sp. Rr 2-17 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1320
ATGAATCATGAAACTTCTTCCAATCAGGTGCGCCAATTTGTCGTCGGCCGCGATGACGACGGCATTCGTCTGGACCGCTGGTTCAAGCGCCACCTGCCCCAGATCGGCTTTGCCACGATCAGCCGCTGGGCGCGCACCGGCCAGATCCGCATCGACGGCAAGCGCGCCGCCCCCGAAGACCGCGTGGCCAAGGGCCAGACCCTGCGCGTGCCACCCGGCGACAGCATTGTCGGCATCGGCGGCGGCAAGGGCGTGCGCGCCCGCAAGCCGCTGACCGAAGCGCAGCTCGAACTGGCCGATTCCATCGTGCTGCACCGCGACCCCAGCGCCATCGTCATCAACAAGCCCCCCGGTCTGGCCACGCAGGGCGGCAGCGGCACGTTCGAGCATGTCGACGGCCTGCTCGACGCCTATGCCAATGGCGGCCCCCGCCCGCGCCTTGTCCACCGTCTGGACAAGGACACGTCGGGCGTGCTGCTGGTCGCCGCCACGCCGGGCAGCGCGGCCTTCTTTTCCAAGCGCTTTTCCGGGCGCACGGCCAAGAAGGTTTATTGGGCGCTGGTGGTGGGCGTTCCCTCGATCGACGAAGGGCTGATCGACCTGCCGCTGGCCAAGCAGCCCGGATCGGGCGGCGAAAAGATGATGGTCGACCAATCCGAACATGGTCAGCCCTCCAAAAGCCGCTATCGCGTGATCGACCGCGCGGGCAACCGCTGCTGCTGGGTCGAGCTGCAACCGCTGACGGGGCGCACCCATCAGTTGCGCGTGCATATGGCCGCCATCGGCCATCCCATCGTGGGCGACGGCAAATATGGCGGCCCGGACGCTTTCCTCTCGGGCAGCATCAGCCGCAAGCTGCATCTCCATGCCCGCCGCCTGATCATCGAGCATCCCGATGGCACGCCGCTGGACGTTGAGGCGCCCCTGCCCGACCATATGGCCGCCAGCCTTGCGCAATTGGGTTTTGAGGAATCCGAAGGCGAATATATCCCCGATCCCACCGGCGAATGGGGACGCGAGGAAAAGAAGGCGGCAGCCAAGGCCCATGCCAAGGACTACCGCAAGGAGCGCAAGGGCGAACGCCGCGGCCGGGCCGACACGGGCCGCGCGCGCAACGATTCGCGCAAGAGCGATTCGCGAAAGAGTCCCGGCGCACGACCCGAAGCCCCGCGCAAATCCGGCCCAAAAAAGGGCCTGGGCAGCAAGCCCAGCGCGAAACCGACCGGTCCCCGCCAAGCGGCAAAACCTGCGGGGAAGCCTGCAGGTCGGCCCGCCGGCAAGCCCTCCGGTAGGCCGCCCGCCCCCCGGGGCCAGCGTTAA
PROTEIN sequence
Length: 440
MNHETSSNQVRQFVVGRDDDGIRLDRWFKRHLPQIGFATISRWARTGQIRIDGKRAAPEDRVAKGQTLRVPPGDSIVGIGGGKGVRARKPLTEAQLELADSIVLHRDPSAIVINKPPGLATQGGSGTFEHVDGLLDAYANGGPRPRLVHRLDKDTSGVLLVAATPGSAAFFSKRFSGRTAKKVYWALVVGVPSIDEGLIDLPLAKQPGSGGEKMMVDQSEHGQPSKSRYRVIDRAGNRCCWVELQPLTGRTHQLRVHMAAIGHPIVGDGKYGGPDAFLSGSISRKLHLHARRLIIEHPDGTPLDVEAPLPDHMAASLAQLGFEESEGEYIPDPTGEWGREEKKAAAKAHAKDYRKERKGERRGRADTGRARNDSRKSDSRKSPGARPEAPRKSGPKKGLGSKPSAKPTGPRQAAKPAGKPAGRPAGKPSGRPPAPRGQR*