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scnpilot_p_inoc_scaffold_59

Search features with annotation key words

Displaying items 181-210 of 343 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_59_181
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

176013..177152
DNA (1140bp) protein (380aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G4E2_NOVAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD27281.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
scnpilot_p_inoc_scaffold_59_182
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

177149..177982
DNA (834bp) protein (278aa)
iron ABC transporter ATP-binding protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B40C02
Iron ABC transporter ATP-binding protein {ECO:0000313|EMBL:KHK93614.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" so
putative ABC transport system ATP-binding protein
scnpilot_p_inoc_scaffold_59_183
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

177990..178928
DNA (939bp) protein (313aa)
Putative ABC transporter periplasmic protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YLW4_9SPHN
Putative ABC transporter periplasmic protein {ECO:0000313|EMBL:GAD49407.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;
mammalian cell entry protein
scnpilot_p_inoc_scaffold_59_184
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

178925..179503
DNA (579bp) protein (193aa)
Putative ABC transporter auxiliary protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A3T4_9SPHN
Putative ABC transporter auxiliary protein {ECO:0000313|EMBL:GAD49408.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;"
hypothetical protein
scnpilot_p_inoc_scaffold_59_185
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(179753..180448)
DNA (696bp) protein (232aa)
ATP12 ATPase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G4E6_NOVAD
ATP12 ATPase {ECO:0000313|EMBL:KHS48725.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterra
ATP12 ATPase
scnpilot_p_inoc_scaffold_59_186
R_Erythrobacter_63_10, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(180448..180669)
DNA (222bp) protein (74aa)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Erythrobacter_63_10_curated
scnpilot_p_inoc_scaffold_59_187
Erythrobacter sp. JL475, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(180666..181331)
DNA (666bp) protein (222aa)
HAD-superfamily hydrolase, subfamily IA, variant 1 n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WAF5_9SPHN
Haloacid dehalogenase {ECO:0000313|EMBL:KEO88061.1}; TaxID=383381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter s
HAD family hydrolase
scnpilot_p_inoc_scaffold_59_188
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(181328..181927)
DNA (600bp) protein (200aa)
Negative transcriptional regulator n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G4E9_NOVAD
Negative transcriptional regulator {ECO:0000313|EMBL:KHS48728.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="No
negative transcriptional regulator
scnpilot_p_inoc_scaffold_59_189
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(181927..183246)
DNA (1320bp) protein (440aa)
Pseudouridine synthase n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9WEI4_9SPHN rbh
Ribosomal large subunit pseudouridine synthase C {ECO:0000313|EMBL:EIZ78613.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobiu
pseudouridine synthase
scnpilot_p_inoc_scaffold_59_190
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

183562..183768
DNA (207bp) protein (69aa)
30S ribosomal protein S21 n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZBM0_9SPHN
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; No
rpsU; 30S ribosomal protein S21
scnpilot_p_inoc_scaffold_59_191
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

183996..184529
DNA (534bp) protein (178aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0HKE7_9SPHN
peptidylprolyl isomerase, FKBP-type
scnpilot_p_inoc_scaffold_59_192
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

184591..184956
DNA (366bp) protein (122aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_0012
aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C (EC:6.3.5.6 6.3.5.7)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9WEJ0_9SPHN
scnpilot_p_inoc_scaffold_59_193
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

184956..186437
DNA (1482bp) protein (494aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=163064
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A (EC:6.3.5.-)
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=GATA_NOVAD
scnpilot_p_inoc_scaffold_59_194
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

186615..188120
DNA (1506bp) protein (502aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000256|SAAS:SAAS00247567}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.-
gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Sphingomonas sp. LH128 RepID=J8VRI0_9SPHN rbh
scnpilot_p_inoc_scaffold_59_195
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(188373..191225)
DNA (2853bp) protein (951aa)
Peptidase M16 domain-containing protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6E8J2_9SPHN rbh
Peptidase M16 {ECO:0000313|EMBL:KHK92988.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malay
peptidase M16
scnpilot_p_inoc_scaffold_59_196
unknown

Not on your lists

comp(191314..191961)
DNA (648bp) protein (216aa)
membrane protein n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CDCA4
scnpilot_p_inoc_scaffold_59_197
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

192152..193918
DNA (1767bp) protein (589aa)
Peptidase M28 n=1 Tax=Sphingobium ummariense RL-3 RepID=T0IZ30_9SPHN rbh
Peptidase M28 {ECO:0000313|EMBL:EQB31001.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL
peptidase M28
scnpilot_p_inoc_scaffold_59_198
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

194034..196613
DNA (2580bp) protein (860aa)
AAA ATPase, central region n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G4G3_NOVAD rbh
ATPase AAA
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
scnpilot_p_inoc_scaffold_59_199
bacterium YEK0313, Bacteria

Not on your lists

comp(196652..197278)
DNA (627bp) protein (209aa)
Glutathione S-transferase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZHA9_AZOL4
Putative GST-like protein YibF {ECO:0000313|EMBL:CEJ15533.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
gst3; glutathione S-transferase
scnpilot_p_inoc_scaffold_59_200
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

197400..198266
DNA (867bp) protein (289aa)
S-methyl-5'-thioadenosine phosphorylase {ECO:0000256|HAMAP-Rule:MF_01963}; EC=2.4.2.28 {ECO:0000256|HAMAP-Rule:MF_01963};; 5'-methylthioadenosine phosphorylase {ECO:0000256|HAMAP-Rule:MF_01963}; TaxID
5'-methylthioadenosine phosphorylase (EC:2.4.2.28)
S-methyl-5'-thioadenosine phosphorylase n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0INV3_9SPHN rbh
scnpilot_p_inoc_scaffold_59_201
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(198321..199709)
DNA (1389bp) protein (463aa)
Aminomethyltransferase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5N3_NOVAD rbh
Similar to vanillate/3-O-methylgallate O-demethylase {ECO:0000313|EMBL:GAO55517.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphin
glycine cleavage T protein (aminomethyl transferase)
scnpilot_p_inoc_scaffold_59_202
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(199738..200445)
DNA (708bp) protein (236aa)
Putative hydrolase n=2 Tax=Sphingomonadaceae RepID=G2IJ06_9SPHN
putative hydrolase
Putative uncharacterized protein {ECO:0000313|EMBL:BAC79256.1}; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingo
scnpilot_p_inoc_scaffold_59_203
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

200617..201492
DNA (876bp) protein (292aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadale
Methylenetetrahydrofolate reductase n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MQ25_9SPHN rbh
methylenetetrahydrofolate reductase
scnpilot_p_inoc_scaffold_59_204
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

201557..202435
DNA (879bp) protein (293aa)
Formyltetrahydrofolate deformylase {ECO:0000256|HAMAP-Rule:MF_01927}; EC=3.5.1.10 {ECO:0000256|HAMAP-Rule:MF_01927};; Formyl-FH(4) hydrolase {ECO:0000256|HAMAP-Rule:MF_01927}; TaxID=1301087 species="B
purU; formyltetrahydrofolate deformylase (EC:3.5.1.10)
Formyltetrahydrofolate deformylase n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MNN1_9SPHN rbh
scnpilot_p_inoc_scaffold_59_205
Sphingobium sp. ba1, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

202453..202845
DNA (393bp) protein (131aa)
Dihydroneopterin aldolase n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MT40_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KFL48714.1}; TaxID=1522072 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp.
dihydroneopterin aldolase
scnpilot_p_inoc_scaffold_59_206
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(203065..203931)
DNA (867bp) protein (289aa)
LysR family transcriptional regulator n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B70C41 rbh
Transcriptional regulator {ECO:0000313|EMBL:GAO54068.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphin
LysR family transcriptional regulator
scnpilot_p_inoc_scaffold_59_207
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

204209..204913
DNA (705bp) protein (235aa)
3-oxoacid CoA-transferase subunit A (EC:2.8.3.5)
3-oxoacid CoA-transferase subunit A n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9WCZ8_9SPHN
3-oxoacid CoA-transferase subunit A {ECO:0000313|EMBL:EIZ78068.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="
scnpilot_p_inoc_scaffold_59_208
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

204919..205554
DNA (636bp) protein (212aa)
Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B {ECO:0000313|EMBL:GAO54070.1}; EC=2.8.3.5 {ECO:0000313|EMBL:GAO54070.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria;
scoB; 3-oxoacid CoA-transferase subunit B (EC:2.8.3.5)
3-oxoacid CoA-transferase subunit B n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YHD2_9SPHN rbh
scnpilot_p_inoc_scaffold_59_209
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(205613..207214)
DNA (1602bp) protein (534aa)
DSBA oxidoreductase n=1 Tax=Sphingomonas wittichii RepID=UPI00030C49E5 rbh
EmrB/QacA family drug resistance transporter
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:ABQ69575.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;
scnpilot_p_inoc_scaffold_59_210
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(207226..208422)
DNA (1197bp) protein (399aa)
secretion protein HlyD n=1 Tax=Sphingomonas melonis RepID=UPI0003820634 rbh
HlyD secretion family protein {ECO:0000313|EMBL:EZP51661.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingom
secretion protein HlyD family protein
Displaying items 181-210 of 343 in total

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