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scnpilot_p_inoc_scaffold_59

Search features with annotation key words

Displaying items 211-240 of 343 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_59_211
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(208428..209903)
DNA (1476bp) protein (492aa)
RND efflux system, outer membrane lipoprotein, NodT family n=2 Tax=Sphingomonas wittichii RepID=A5VBB1_SPHWW rbh
RND efflux system outer membrane lipoprotein
RND efflux system, outer membrane lipoprotein, NodT family {ECO:0000313|EMBL:ABQ69577.1}; Flags: Precursor;; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphi
scnpilot_p_inoc_scaffold_59_212
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(210079..211008)
DNA (930bp) protein (310aa)
LysR family transcriptional regulator n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B35FD6 rbh
Uncharacterized protein {ECO:0000313|EMBL:EQB16365.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
LysR family transcriptional regulator
scnpilot_p_inoc_scaffold_59_213
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(211076..211954)
DNA (879bp) protein (293aa)
2-pyrone-4,6-dicarboxylate hydrolase n=1 Tax=Sphingobium xenophagum RepID=UPI00031AFF9D
2-pyrone-4,6-dicarboxylate hydrolase
2-pyrone-4,6-dicarbaxylate hydrolase {ECO:0000313|EMBL:EHJ59300.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source
scnpilot_p_inoc_scaffold_59_214
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(211968..213029)
DNA (1062bp) protein (354aa)
Methylitaconate delta2-delta3-isomerase n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9CCM9_9SPHN rbh
Methylitaconate delta2-delta3-isomerase {ECO:0000313|EMBL:EIZ81210.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sour
4-oxalomesaconate tautomerase
scnpilot_p_inoc_scaffold_59_215
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(213311..213985)
DNA (675bp) protein (225aa)
4-carboxy-4-hydroxy-2-oxoadipate aldolase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G4H0_NOVAD rbh
4-hydroxy-4-methyl-2-oxoadipate aldolase {ECO:0000313|EMBL:KHS44427.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sour
hypothetical protein
scnpilot_p_inoc_scaffold_59_216
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

214100..215263
DNA (1164bp) protein (388aa)
Transcriptional regulator, LysR family n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G4H1_NOVAD rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:KHS44426.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source=
LysR family transcriptional regulator
scnpilot_p_inoc_scaffold_59_217
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

215374..216213
DNA (840bp) protein (280aa)
6-phosphogluconate dehydrogenase, NAD-binding protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G4H2_NOVAD rbh
3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases {ECO:0000313|EMBL:GAO55095.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sp
6-phosphogluconate dehydrogenase
scnpilot_p_inoc_scaffold_59_218
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

216220..217245
DNA (1026bp) protein (342aa)
4-oxalomesaconate hydratase {ECO:0000313|EMBL:ABD27250.1}; EC=4.2.1.83 {ECO:0000313|EMBL:ABD27250.1};; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomon
4-oxalomesaconate hydratase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G4H3_NOVAD rbh
amidohydrolase
scnpilot_p_inoc_scaffold_59_219
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

217301..217747
DNA (447bp) protein (149aa)
Protocatechuate 4,5-dioxygenase subunit alpha {ECO:0000313|EMBL:KHS44423.1}; EC=1.13.11.8 {ECO:0000313|EMBL:KHS44423.1};; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomon
protocatechuate 4,5-dioxygenase subunit alpha (EC:1.13.11.8)
Protocatechuate 4,5-dioxygenase alpha subunit n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G4H4_NOVAD
scnpilot_p_inoc_scaffold_59_220
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

217759..218601
DNA (843bp) protein (281aa)
protocatechuate 4,5-dioxygenase subunit beta (EC:1.13.11.8)
Protocatechuate 4,5-dioxygenase beta subunit {ECO:0000313|EMBL:ABD27248.1}; EC=1.13.11.8 {ECO:0000313|EMBL:ABD27248.1};; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomon
Protocatechuate 4,5-dioxygenase beta subunit n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G4H5_NOVAD rbh
scnpilot_p_inoc_scaffold_59_221
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

218661..219611
DNA (951bp) protein (317aa)
4-carboxy-2-hydroxymuconate semialdehyde dehydrogenase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G4H6_NOVAD rbh
Oxidoreductase-like protein {ECO:0000313|EMBL:KHS44421.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphin
oxidoreductase-like protein
scnpilot_p_inoc_scaffold_59_222
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

219876..220868
DNA (993bp) protein (331aa)
aldo/keto reductase n=1 Tax=Sphingobium sp. YL23 RepID=UPI0003AB29E2 rbh
Aldo/keto reductase {ECO:0000313|EMBL:KHS43437.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium s
aldo/keto reductase
scnpilot_p_inoc_scaffold_59_223
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(220906..221334)
DNA (429bp) protein (143aa)
Fur family transcriptional regulator, ferric uptake regulator n=1 Tax=Sphingomonas sp. LH128 RepID=J8VWA1_9SPHN
Fur family transcriptional regulator {ECO:0000313|EMBL:KHK92963.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source
Fur family transcriptional regulator
scnpilot_p_inoc_scaffold_59_224
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(221450..221893)
DNA (444bp) protein (148aa)
MucR family transcriptional regulator n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IN05_9SPHN
MucR family transcriptional regulator
MucR family transcriptional regulator {ECO:0000313|EMBL:CCA92807.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source
scnpilot_p_inoc_scaffold_59_225
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(222066..222542)
DNA (477bp) protein (159aa)
Acetyltransferase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IN06_9SPHN
acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:CCA92808.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp
scnpilot_p_inoc_scaffold_59_226
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(222564..223256)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0GTC3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB07201.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
metal-dependent protease
scnpilot_p_inoc_scaffold_59_227
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(223253..223828)
DNA (576bp) protein (192aa)
Nitrogen-fixing NifU-like protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G9P0_NOVAD
nitrogen-fixing NifU-like
Iron transporter {ECO:0000313|EMBL:EQB07202.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium li
scnpilot_p_inoc_scaffold_59_228
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

223966..226851
DNA (2886bp) protein (962aa)
Zinc protease n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6E8G1_9SPHN rbh
Peptidase M16 {ECO:0000313|EMBL:KHK92958.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malay
peptidase M16
scnpilot_p_inoc_scaffold_59_229
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

227097..228467
DNA (1371bp) protein (457aa)
3-deoxy-7-phosphoheptulonate synthase n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6E8G0_9SPHN rbh
phospho-2-dehydro-3-deoxyheptonate aldolase
3-deoxy-7-phosphoheptulonate synthase {ECO:0000313|EMBL:EHJ62500.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sourc
scnpilot_p_inoc_scaffold_59_230
unknown

Not on your lists

228546..229070
DNA (525bp) protein (175aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_59_231
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

229067..229699
DNA (633bp) protein (211aa)
LysE type translocator family protein n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9C695_9SPHN
LysE type translocator family protein {ECO:0000313|EMBL:EIZ79332.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source
lysine exporter protein LysE/YggA
scnpilot_p_inoc_scaffold_59_232
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(229935..230912)
DNA (978bp) protein (326aa)
quinone oxidoreductase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CC57D rbh
quinone oxidoreductase
Quinone oxidoreductase {ECO:0000313|EMBL:AJP73211.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
scnpilot_p_inoc_scaffold_59_233
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(230920..231537)
DNA (618bp) protein (206aa)
chromosome partitioning protein ParB n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B5C1BC
Putative ParB-like nuclease {ECO:0000313|EMBL:EZP82892.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphi
hypothetical protein
scnpilot_p_inoc_scaffold_59_234
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(231557..233185)
DNA (1629bp) protein (543aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8SMY0_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EJU14169.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
sulfate transporter
scnpilot_p_inoc_scaffold_59_235
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(233219..234103)
DNA (885bp) protein (295aa)
Transglutaminase-like enzyme n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z5J3_9SPHN rbh
Transglutaminase-like enzyme {ECO:0000313|EMBL:EGD60103.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosph
transglutaminase
scnpilot_p_inoc_scaffold_59_236
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(234111..236561)
DNA (2451bp) protein (817aa)
hypothetical protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B56459 rbh
Protein containing domains DUF404, DUF407, DUF403 {ECO:0000313|EMBL:GAO54100.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingob
hypothetical protein
scnpilot_p_inoc_scaffold_59_237
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(236596..239955)
DNA (3360bp) protein (1120aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z5J5_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EGD60105.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
IMP dehydrogenase
scnpilot_p_inoc_scaffold_59_238
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

240092..241162
DNA (1071bp) protein (357aa)
alr; hypothetical protein (EC:5.1.1.1)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|SAAS:SAAS00021659}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|SAAS:SAAS00021659};; TaxID=1117943 species="Bacteria; Proteo
alanine racemase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248A45C rbh
scnpilot_p_inoc_scaffold_59_239
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(241204..243672)
DNA (2469bp) protein (823aa)
TonB-dependent receptor n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9CD83_9SPHN
TonB-dependent receptor {ECO:0000313|EMBL:EIZ81370.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
TonB-dependent receptor-like protein
scnpilot_p_inoc_scaffold_59_240
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

243876..245015
DNA (1140bp) protein (380aa)
Putative uncharacterized protein n=2 Tax=Novosphingobium nitrogenifigens RepID=F1Z7A9_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EGD59528.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
putative permease
Displaying items 211-240 of 343 in total

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