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scnpilot_p_inoc_scaffold_59

Search features with annotation key words

Displaying items 241-270 of 343 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_59_241
Sphingobium sp. AP49, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(245006..247360)
DNA (2355bp) protein (785aa)
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Sphingobium sp. AP49 RepID=J2D4E7_9SPHN
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EJK84544.1}; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomon
PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase
scnpilot_p_inoc_scaffold_59_242
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(247498..248376)
DNA (879bp) protein (293aa)
Citrate lyase beta subunit n=1 Tax=Novosphingobium sp. AP12 RepID=J2GSH4_9SPHN rbh
Citrate lyase subunit beta {ECO:0000313|EMBL:EZP84824.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphin
malyl-CoA thiolesterase
scnpilot_p_inoc_scaffold_59_243
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(248514..248954)
DNA (441bp) protein (147aa)
CheW protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z7Q9_9SPHN
Positive regulator of cheA protein activity {ECO:0000313|EMBL:GAO53020.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;"
purine-binding chemotaxis protein CheW
scnpilot_p_inoc_scaffold_59_244
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(249046..249540)
DNA (495bp) protein (165aa)
Flavin reductase-like, FMN-binding n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MX76_9SPHN
Monooxygenase {ECO:0000313|EMBL:KHK91832.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malay
flavin reductase-like, FMN-binding
scnpilot_p_inoc_scaffold_59_245
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(249661..251958)
DNA (2298bp) protein (766aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Nov
ATP-dependent DNA helicase, Rep family n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G8T6_NOVAD rbh
ATP-dependent DNA helicase Rep
scnpilot_p_inoc_scaffold_59_246
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

252065..253342
DNA (1278bp) protein (426aa)
MFS transporter n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B2EC03
Permeases of the major facilitator superfamily {ECO:0000313|EMBL:GAO56232.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium
general substrate transporter
scnpilot_p_inoc_scaffold_59_247
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(253555..254115)
DNA (561bp) protein (187aa)
N6-adenine-specific methylase n=1 Tax=Sphingomonas sp. LH128 RepID=J8S906_9SPHN
N6-adenine-specific methylase {ECO:0000313|EMBL:EZP83877.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosp
methyltransferase
scnpilot_p_inoc_scaffold_59_248
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(254112..255167)
DNA (1056bp) protein (352aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomona
Pseudouridine synthase n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z851_9SPHN rbh
pseudouridine synthase
scnpilot_p_inoc_scaffold_59_249
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

255296..257002
DNA (1707bp) protein (569aa)
beta-lactamase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B40DA3 rbh
Putative major facilitator superfamily transporter {ECO:0000313|EMBL:GAO38541.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomona
hypothetical protein
scnpilot_p_inoc_scaffold_59_250
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(257251..258567)
DNA (1317bp) protein (439aa)
FolC bifunctional protein (EC:6.3.2.17)
Bifunctional FolC protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z853_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:GAO56227.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
scnpilot_p_inoc_scaffold_59_251
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(258591..259445)
DNA (855bp) protein (285aa)
acetyl-CoA carboxylase carboxyl transferase subunit beta (EC:6.4.1.2)
acetyl-CoA carboxylase subunit beta n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B553FB rbh
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395}; Short=ACCase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; Short=Acetyl-CoA carboxylase carboxyltr
scnpilot_p_inoc_scaffold_59_252
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(259442..260242)
DNA (801bp) protein (267aa)
trpA; tryptophan synthase subunit alpha (EC:4.2.1.20)
Tryptophan synthase alpha chain {ECO:0000255|HAMAP-Rule:MF_00131}; EC=4.2.1.20 {ECO:0000255|HAMAP-Rule:MF_00131};; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales
Tryptophan synthase alpha chain n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=TRPA_NOVAD rbh
scnpilot_p_inoc_scaffold_59_253
unknown

Not on your lists

comp(260239..260418)
DNA (180bp) protein (60aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_59_254
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(260415..261665)
DNA (1251bp) protein (417aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales
tryptophan synthase subunit beta (EC:4.2.1.20)
Tryptophan synthase beta chain n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZSK3_9SPHN
scnpilot_p_inoc_scaffold_59_255
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

261967..262440
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A0Q1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAD48318.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
scnpilot_p_inoc_scaffold_59_256
unknown

Not on your lists

262659..263123
DNA (465bp) protein (155aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_59_257
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(263166..263810)
DNA (645bp) protein (215aa)
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123216}; Short=PRAI {ECO:0000256|HAMAP-Rule:MF_00135};; EC=5.3.1.24 {ECO:0000256|HAMAP-Rule:MF_0013
N-(5'-phosphoribosyl)anthranilate isomerase (EC:5.3.1.24)
N-(5'-phosphoribosyl)anthranilate isomerase n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z859_9SPHN
scnpilot_p_inoc_scaffold_59_258
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(263815..264312)
DNA (498bp) protein (166aa)
N-acetyltransferase GCN5 n=1 Tax=Novosphingobium nitrogenifigens RepID=UPI0003672FE3
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:EGD59164.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Nov
GCN5 family acetyltransferase
scnpilot_p_inoc_scaffold_59_259
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(264318..264995)
DNA (678bp) protein (226aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512};; OMP decarboxylase
orotidine-5'-phosphate decarboxylase (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase n=1 Tax=Sphingomonas sp. LH128 RepID=J8VMQ9_9SPHN rbh
scnpilot_p_inoc_scaffold_59_260
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(265005..265325)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9WDZ5_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EIZ78446.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
hypothetical protein
scnpilot_p_inoc_scaffold_59_261
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(265435..266748)
DNA (1314bp) protein (438aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID
adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YJG6_9SPHN rbh
scnpilot_p_inoc_scaffold_59_262
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(266841..267644)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9WE23_9SPHN
DNA repair protein radC {ECO:0000313|EMBL:GAO56212.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
hypothetical protein
scnpilot_p_inoc_scaffold_59_263
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

267736..270912
DNA (3177bp) protein (1059aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium sp. PP1Y RepID=F6ILH8_9SPHN rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCA92280.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
scnpilot_p_inoc_scaffold_59_264
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

270909..271232
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G8R6_NOVAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCA92281.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
scnpilot_p_inoc_scaffold_59_265
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

271232..271627
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G8R5_NOVAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD25758.1}; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" s
scnpilot_p_inoc_scaffold_59_266
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

271965..272285
DNA (321bp) protein (107aa)
Putative ATP synthase protein I n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G8R4_NOVAD
ATP synthase I {ECO:0000313|EMBL:KHK91039.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium mala
ATP synthase I
scnpilot_p_inoc_scaffold_59_267
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

272379..273167
DNA (789bp) protein (263aa)
ATP synthase F0F1 subunit A (EC:3.6.3.14)
F0F1 ATP synthase subunit A n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B30D2C rbh
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:
scnpilot_p_inoc_scaffold_59_268
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

273230..273457
DNA (228bp) protein (76aa)
ATP synthase C chain {ECO:0000313|EMBL:BAK66965.1}; EC=3.6.3.14 {ECO:0000313|EMBL:BAK66965.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae
ATP synthase C chain n=1 Tax=Sphingobium sp. SYK-6 RepID=G2II42_9SPHN
atpE; ATP synthase subunit C
scnpilot_p_inoc_scaffold_59_269
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

273614..274105
DNA (492bp) protein (164aa)
ATP synthase subunit b n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G8R1_NOVAD
H+-transporting two-sector ATPase subunit B/B'
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subuni
scnpilot_p_inoc_scaffold_59_270
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

274098..274652
DNA (555bp) protein (185aa)
ATP synthase subunit B n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B48DD8
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subuni
H+-transporting two-sector ATPase subunit B/B'
Displaying items 241-270 of 343 in total

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