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scnpilot_p_inoc_scaffold_59_241

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(245006..247360)

Top 3 Functional Annotations

Value Algorithm Source
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Sphingobium sp. AP49 RepID=J2D4E7_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 60.2
  • Coverage: 759.0
  • Bit_score: 876
  • Evalue 2.10e-251
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EJK84544.1}; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomon similarity UNIPROT
DB: UniProtKB
  • Identity: 60.2
  • Coverage: 759.0
  • Bit_score: 876
  • Evalue 2.90e-251
PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase similarity KEGG
DB: KEGG
  • Identity: 44.4
  • Coverage: 478.0
  • Bit_score: 365
  • Evalue 4.40e-98

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Taxonomy

Sphingobium sp. AP49 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2355
GTGGGCCTGCCGAGCGTGCCGATACCAAGAGTGACCCATTGGCTGCTTAGCACCGGCGAGAAAGTCTCGGCGCCCATCGCCGCACAATTGGCCAATGGCCTGTTCGGATCACTGCCGATTTTCATCGGCGGGGTCATCAACAGCGTGGCGGTGGCGGCGGTGGCGGCGGGGCGGATGCACACCGCCCCCTTCATCGGCTGGATGGTGTTCGAGGCGGTGCTGGGGCTGGTGCGGATCGGCGTGGTCCAGTCCTCGCACAGCGCGCCGCCCGAAAAGCTGGAGCGGCTGCGCCATCTGGCCAGTCTGCTGTCGGTGGCATGGGCAGCCTCGGTGGGCATCGGCACGCTGCTGTGCCTGACCAGCGGCGACTGGGTGCTGGCCACGATTGCCTGCCTGTCGACCGCGGCGATGGTCTGCGGCATTTGCCTGCGCAATTTCGGCACGCCGCGTCTGGCTGCGGTCATGACCTTTGCTGCGCTGGCCCCCTGTGCGGTGGGCGGGTTGATGACGCAGGAGCCTTCGCTGCGCATCATCAGCGTGCAATTGCCGATCTTCATGACCACGATCTTTTCCGCCTCTTTCGGACTGCACCGGATGCTGGTTTCCTGGATGACCACCACGGCGGAGCTGAAACGCAGCAAAGCGCTCAATGAAACGATCCTGCAGTCGAACCCCGATCTGACGCTGATTCTGGACGAGAACCATCAGATCATTTTCAGCAACCGTATGCCCGAACAGCTCGCCTGCCAGTCGGCGCTGGTGGGGCGCGATTTCTATTCGGTGCTGGAGGAAAAGGATCGCCCTGCGGCGGCGGCGGCGCTGGCGCGCGCGCAGCGGGGCGAATTGTCCAGCTTCACCACATGCTTTACGCGCCCCTCGGGCGAGAAACTGTGGTTTGACACGGTGGTCAACGAAACCTCGGACGCCTCGGGCCGGTTTATCGTGGTGGCCCGCGACATCACCCGGCAAAAGCATTCCGAAGAGCGCGCGATCTGGATGGCGCATCACGATACGCTGACCGGCCTGCCCAATCGCGCGGTGCTTCAGGAAAGGCTGGATGCCGCGCTGGTGACGGGCGATGGCGCGCACGAATTGAGCCGCGATGATAGTGTCGCCGGTCATGCGCTGCTGATCGTGGATGTCGATAATTTCAAGGCGATCAATGATACGCTGGGCCATGACGGCGGTGATGTGCTGCTGCGCGCGTTGGCGGCGCGGCTGTGTGCGGCGGTGGGGCATGGTGATCTGGTAGCGCGCACGGGGGGCGATGAATTCGCGCTGATCGTGGCGGCAGGCGATGCCGAGGCGCTGCATAGCATCGCGGCGCGGATCTATGAGGAATTGCGCGAACCGATCCTGCATGGCGACCGCGTGATGGAATGCGGCGCCAGCATCTGGGCCAGTTTCATCCCGCAGGACGGACCGGGCCGGTCCGAGGTGATGAAGGCGGCCGACATTGCGCTCTATGCCGCCAAGGCGGCGGGCCGGGCACAGATGAAGATCTTCGAGCCCGCCATGATGGACGAGGTCGAGCGCCATCAGGCGATGATCACCGCCGCCCGCTTTGCCCTGAAGCGCAAGACCATCGTACCGCATTACCAGCCCAAGGTCTGTCTGGGCGGCGAAGGACGGGGCGACGGGCGGATCGTGGGTTTCGAGGCGCTGCTGCGCTGGCGCGACCGCGACGGGCATGTGCGCGGCCCCGATGCGATCAAGGCCGCCTTCAACGACCCGATCCTGAGCGTGGCGATCAGCGATTACATGCTGGAGATGATCCTGGATGATATCGAAGGCTGGGTGGCGGCGGGCGTGCCGTTCGGCCATGTCGCCGTCAATGTGACCAGCGGCGATTTCCGCCCCGGCGGCATTGTCGAAACCGTGCTGGACCGGCTCAAGGCCCGCGACCTGCCCGCCTCATGCCTGCAGATCGAGGTGACCGAGGATGTGTTCCTCGACAAGGGGGCGCTGGATGTCGAACGCGCGCTCAAACGGCTCAGCCATCACGGGTTGCGCATTGCGCTCGACGATTTCGGCACCGGCTATGCCTCGCTCTCGCATCTCACCCAGTTCCCGGTGGACCTGCTGAAAATCGACCGCTCCTTTATCGGCCAGATGGGCGCCAAGGGCGATGCCGAGGCGATTTCCTCGATCGTCATCAATCTGGGCCATTGCCTCGGGCTGGAGGTGATTGCCGAAGGGGTGGAAACGATCCAGCAGCAGGAACAACTGATCGCGATGGGCTGCGATACGGGGCAAGGCTATCTCTACGCCCGGGCGATGCCCGCCACCGAAGTGGCCGCACATGTGCGCGAGCATGAAACCGCCCGCGCCCTGCTCCACCTGCGTCAGGCCTGA
PROTEIN sequence
Length: 785
VGLPSVPIPRVTHWLLSTGEKVSAPIAAQLANGLFGSLPIFIGGVINSVAVAAVAAGRMHTAPFIGWMVFEAVLGLVRIGVVQSSHSAPPEKLERLRHLASLLSVAWAASVGIGTLLCLTSGDWVLATIACLSTAAMVCGICLRNFGTPRLAAVMTFAALAPCAVGGLMTQEPSLRIISVQLPIFMTTIFSASFGLHRMLVSWMTTTAELKRSKALNETILQSNPDLTLILDENHQIIFSNRMPEQLACQSALVGRDFYSVLEEKDRPAAAAALARAQRGELSSFTTCFTRPSGEKLWFDTVVNETSDASGRFIVVARDITRQKHSEERAIWMAHHDTLTGLPNRAVLQERLDAALVTGDGAHELSRDDSVAGHALLIVDVDNFKAINDTLGHDGGDVLLRALAARLCAAVGHGDLVARTGGDEFALIVAAGDAEALHSIAARIYEELREPILHGDRVMECGASIWASFIPQDGPGRSEVMKAADIALYAAKAAGRAQMKIFEPAMMDEVERHQAMITAARFALKRKTIVPHYQPKVCLGGEGRGDGRIVGFEALLRWRDRDGHVRGPDAIKAAFNDPILSVAISDYMLEMILDDIEGWVAAGVPFGHVAVNVTSGDFRPGGIVETVLDRLKARDLPASCLQIEVTEDVFLDKGALDVERALKRLSHHGLRIALDDFGTGYASLSHLTQFPVDLLKIDRSFIGQMGAKGDAEAISSIVINLGHCLGLEVIAEGVETIQQQEQLIAMGCDTGQGYLYARAMPATEVAAHVREHETARALLHLRQA*