ggKbase home page

scnpilot_p_inoc_scaffold_59

Search features with annotation key words

Displaying items 271-300 of 343 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_59_271
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

274731..274925
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0HBN6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB13746.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
hypothetical protein
scnpilot_p_inoc_scaffold_59_272
unknown

Not on your lists

275113..275466
DNA (354bp) protein (118aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_59_273
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(275477..276235)
DNA (759bp) protein (253aa)
Hydroxyacylglutathione hydrolase {ECO:0000313|EMBL:AKH41272.1}; EC=3.1.2.6 {ECO:0000313|EMBL:AKH41272.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Eryth
hydroxyacylglutathione hydrolase (EC:3.1.2.6)
hydroxyacylglutathione hydrolase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B79EBF rbh
scnpilot_p_inoc_scaffold_59_274
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(276554..278257)
DNA (1704bp) protein (568aa)
30S ribosomal protein S1 n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G8Q7_NOVAD rbh
rpsA; 30S ribosomal protein S1
30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphing
scnpilot_p_inoc_scaffold_59_275
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

278645..279088
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Novosphingobium nitrogenifigens RepID=UPI00035D51E4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGD57701.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
scnpilot_p_inoc_scaffold_59_276
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(279085..279723)
DNA (639bp) protein (213aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:
Cytidylate kinase n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0HZX2_9SPHN
cytidylate kinase
scnpilot_p_inoc_scaffold_59_277
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(279720..280004)
DNA (285bp) protein (95aa)
permease n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B5A23A
putative permease
Putative permease {ECO:0000313|EMBL:CCA92292.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp
scnpilot_p_inoc_scaffold_59_278
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(280001..281341)
DNA (1341bp) protein (447aa)
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000255|HAMAP-Rule:MF_00210}; EC=2.5.1.19 {ECO:0000255|HAMAP-Rule:MF_00210};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000255|HAMAP-Rule:MF_0
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=AROA_NOVAD rbh
scnpilot_p_inoc_scaffold_59_279
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

281556..281873
DNA (318bp) protein (106aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZDB6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EGD57442.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
hypothetical protein
scnpilot_p_inoc_scaffold_59_280
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


282354..283793
DNA (1440bp) protein (480aa)
Signal recognition particle protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EEV5_9SPHN rbh
RNA-binding protein
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphin
scnpilot_p_inoc_scaffold_59_281
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


283820..284185
DNA (366bp) protein (122aa)
30S ribosomal protein S16 n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B4BA57
rpsP; 30S ribosomal protein S16
30S ribosomal protein S16 {ECO:0000255|HAMAP-Rule:MF_00385}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosp
scnpilot_p_inoc_scaffold_59_282
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

284185..284682
DNA (498bp) protein (166aa)
Ribosome maturation factor RimM n=1 Tax=Novosphingobium sp. PP1Y RepID=F6ILJ5_9SPHN
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadac
16S rRNA-processing protein RimM
scnpilot_p_inoc_scaffold_59_283
Erythrobacter sp. JL475, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

284679..285035
DNA (357bp) protein (119aa)
Uncharacterized protein {ECO:0000313|EMBL:KEO87439.1}; TaxID=383381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter
scnpilot_p_inoc_scaffold_59_284
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

285155..285898
DNA (744bp) protein (248aa)
hypothetical protein n=1 Tax=Sphingomonas elodea RepID=UPI00026319F8
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
scnpilot_p_inoc_scaffold_59_285
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

285905..286696
DNA (792bp) protein (264aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltrans
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EEW0_9SPHN
tRNA (guanine-N1)-methyltransferase
scnpilot_p_inoc_scaffold_59_286
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


286693..287073
DNA (381bp) protein (127aa)
50S ribosomal protein L19 n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A0K0_9SPHN
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; N
50S ribosomal protein L19
scnpilot_p_inoc_scaffold_59_287
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

287200..289440
DNA (2241bp) protein (747aa)
dipeptidyl-peptidase IV (EC:3.4.14.5)
Dipeptidyl-peptidase IV n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9L9C2_9SPHN rbh
Dipeptidyl-peptidase IV {ECO:0000313|EMBL:EIZ81109.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
scnpilot_p_inoc_scaffold_59_288
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

289524..290549
DNA (1026bp) protein (342aa)
aspartate-semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:000
Aspartate-semialdehyde dehydrogenase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G8G9_NOVAD rbh
scnpilot_p_inoc_scaffold_59_289
Sphingobium sp. AP49, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

290551..291186
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI00036DD86F
Putative membrane protein {ECO:0000313|EMBL:EJK86107.1}; Flags: Precursor;; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" so
hypothetical protein
scnpilot_p_inoc_scaffold_59_290
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(291220..291888)
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI00028911F0
Uncharacterized protein {ECO:0000313|EMBL:GAO39627.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas c
hypothetical protein
scnpilot_p_inoc_scaffold_59_291
unknown

Not on your lists

292108..292410
DNA (303bp) protein (101aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_59_292
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

292590..293369
DNA (780bp) protein (260aa)
Alpha/beta hydrolase n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6E7B1_9SPHN rbh
Hydrolase {ECO:0000313|EMBL:KHK91762.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysien
hydrolase
scnpilot_p_inoc_scaffold_59_293
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(293359..294135)
DNA (777bp) protein (259aa)
TonB family protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z9N4_9SPHN
TonB family protein {ECO:0000313|EMBL:EGD58708.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium
TonB-like protein
scnpilot_p_inoc_scaffold_59_294
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(294217..295182)
DNA (966bp) protein (322aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00036A8E13 rbh
Thiamin biosynthesis lipoprotein apbE {ECO:0000313|EMBL:GAO55187.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sourc
thiamine biosynthesis protein ApbE
scnpilot_p_inoc_scaffold_59_295
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(295182..296063)
DNA (882bp) protein (294aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI000380AC3A rbh
Uncharacterized protein {ECO:0000313|EMBL:GAM00504.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas p
nickel uptake transporter family protein
scnpilot_p_inoc_scaffold_59_296
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(296093..296578)
DNA (486bp) protein (162aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IPE6_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK68127.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingo
scnpilot_p_inoc_scaffold_59_297
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(296591..297214)
DNA (624bp) protein (208aa)
membrane protein n=1 Tax=Sphingomonas wittichii RepID=UPI000318D244
Uncharacterized protein {ECO:0000313|EMBL:GAM00502.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas p
PepSY-associated TM helix domain-containing protein
scnpilot_p_inoc_scaffold_59_298
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(297211..297945)
DNA (735bp) protein (245aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z9N3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EGD58709.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
hypothetical protein
scnpilot_p_inoc_scaffold_59_299
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(297948..300287)
DNA (2340bp) protein (780aa)
TonB-dependent siderophore receptor n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z9N2_9SPHN rbh
TonB-dependent siderophore receptor {ECO:0000313|EMBL:EGD58710.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="
TonB-dependent siderophore receptor
scnpilot_p_inoc_scaffold_59_300
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

300591..301853
DNA (1263bp) protein (421aa)
Metal dependent phosphohydrolase n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZBH8_9SPHN rbh
Metal dependent phosphohydrolase {ECO:0000313|EMBL:KHS48864.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novo
metal dependent phosphohydrolase
Displaying items 271-300 of 343 in total

View Taxonomy