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scnpilot_p_inoc_scaffold_59

Search features with annotation key words

Displaying items 301-330 of 343 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_59_301
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(301859..302770)
DNA (912bp) protein (304aa)
LysR family transcriptional regulator n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZAP0_9SPHN rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:EGD58323.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source
LysR family transcriptional regulator
scnpilot_p_inoc_scaffold_59_302
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

303070..304410
DNA (1341bp) protein (447aa)
Adenosine/AMP deaminase n=1 Tax=Sphingomonas sp. LH128 RepID=J8VQL6_9SPHN rbh
Adenosine/AMP deaminase {ECO:0000313|EMBL:EJU10328.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
adenosine/AMP deaminase
scnpilot_p_inoc_scaffold_59_303
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

304521..306935
DNA (2415bp) protein (805aa)
TonB-dependent receptor n=1 Tax=Sphingomonas sp. LH128 RepID=J8VBX5_9SPHN rbh
TonB-dependent receptor {ECO:0000313|EMBL:EJU10327.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
TonB-dependent receptor
scnpilot_p_inoc_scaffold_59_304
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

306997..308133
DNA (1137bp) protein (379aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0002F7CAB2 rbh
Purine nucleoside permease {ECO:0000313|EMBL:CCW16432.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium
putative purine nucleoside permease
scnpilot_p_inoc_scaffold_59_305
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(308130..308867)
DNA (738bp) protein (246aa)
Enoyl-CoA hydratase {ECO:0000313|EMBL:KHS45041.1}; EC=4.2.1.17 {ECO:0000313|EMBL:KHS45041.1};; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae;
Enoyl-CoA hydratase/isomerase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=A4XEF6_NOVAD
enoyl-CoA hydratase/isomerase
scnpilot_p_inoc_scaffold_59_306
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(308945..310165)
DNA (1221bp) protein (407aa)
Poly-beta-hydroxyalkanoate depolymerase n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z8X3_9SPHN rbh
Poly-beta-hydroxyalkanoate depolymerase {ECO:0000313|EMBL:EGD58866.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sour
poly(3-hydroxybutyrate) depolymerase
scnpilot_p_inoc_scaffold_59_307
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

310311..310964
DNA (654bp) protein (218aa)
Glutathione S-transferase domain protein n=2 Tax=Novosphingobium nitrogenifigens RepID=F1Z8X2_9SPHN rbh
Glutathione S-transferase domain protein {ECO:0000313|EMBL:EGD58867.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sou
glutathione S-transferase rbh
scnpilot_p_inoc_scaffold_59_308
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

311074..312402
DNA (1329bp) protein (443aa)
hypothetical protein n=1 Tax=Sphingobium sp. YL23 RepID=UPI0003B614CF
Uncharacterized protein {ECO:0000313|EMBL:GAO54612.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
hypothetical protein
scnpilot_p_inoc_scaffold_59_309
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

312449..313381
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G8F7_NOVAD rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD25866.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
scnpilot_p_inoc_scaffold_59_310
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(313408..313803)
DNA (396bp) protein (132aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZDB9_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EGD57439.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
scnpilot_p_inoc_scaffold_59_311
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(313903..315504)
DNA (1602bp) protein (534aa)
methyl-accepting chemotaxis protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248A3A4 rbh
methyl-accepting chemotaxis sensory transducer Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
methyl-accepting chemotaxis sensory transducer
scnpilot_p_inoc_scaffold_59_312
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

315774..315989
DNA (216bp) protein (72aa)
hypothetical protein n=1 Tax=Novosphingobium nitrogenifigens RepID=UPI0002DB9CDC
Uncharacterized protein {ECO:0000313|EMBL:KDB51089.1}; TaxID=1286631 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans subsp. natans D
scnpilot_p_inoc_scaffold_59_313
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

315961..316989
DNA (1029bp) protein (343aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI00037D303E
Uncharacterized protein {ECO:0000313|EMBL:EGD58547.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
hypothetical protein
scnpilot_p_inoc_scaffold_59_314
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(317053..318459)
DNA (1407bp) protein (469aa)
UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8)
UDP-N-acetylmuramate--L-alanine ligase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G8F4_NOVAD rbh
UDP-N-acetylmuramate--alanine ligase {ECO:0000313|EMBL:KHK91748.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source
scnpilot_p_inoc_scaffold_59_315
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

318574..319386
DNA (813bp) protein (271aa)
Putative MccF-like protein (Microcin C7 resistance) n=1 Tax=Novosphingobium sp. AP12 RepID=J2G558_9SPHN
Putative MccF-like protein (Microcin C7 resistance) {ECO:0000313|EMBL:EJL24825.1}; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphing
carboxypeptidase
scnpilot_p_inoc_scaffold_59_316
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

319512..320402
DNA (891bp) protein (297aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphin
[acyl-carrier-protein] S-malonyltransferase (EC:2.3.1.39)
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G8F2_NOVAD rbh
scnpilot_p_inoc_scaffold_59_317
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

320406..321158
DNA (753bp) protein (251aa)
3-oxoacyl-[acyl-carrier-protein] reductase (EC:1.1.1.100)
3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:ABD25872.1}; EC=1.1.1.100 {ECO:0000313|EMBL:ABD25872.1};; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobac
3-oxoacyl-ACP synthase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B75872
scnpilot_p_inoc_scaffold_59_318
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(321212..322294)
DNA (1083bp) protein (361aa)
DNA replication and repair protein RecF n=1 Tax=Novosphingobium sp. AP12 RepID=J2ZSV6_9SPHN rbh
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphing
DNA replication and repair protein RecF
scnpilot_p_inoc_scaffold_59_319
R_Erythrobacter_63_10, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

322486..322689
DNA (204bp) protein (68aa)
Phage shock protein C, PspC n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5E2_NOVAD
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Erythrobacter_63_10_curated
phage shock protein C, PspC
scnpilot_p_inoc_scaffold_59_320
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(322964..323710)
DNA (747bp) protein (249aa)
Conserved hypothetical integral membrane protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V3C4_SPHWW rbh
Uncharacterized protein {ECO:0000313|EMBL:AKH42345.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Alterer
hypothetical protein
scnpilot_p_inoc_scaffold_59_321
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(323801..326614)
DNA (2814bp) protein (938aa)
TonB-dependent receptor n=1 Tax=Sphingobium indicum B90A RepID=I5BEH1_9SPHN rbh
TonB-dependent receptor {ECO:0000313|EMBL:AJR24363.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp.
TonB-dependent receptor
scnpilot_p_inoc_scaffold_59_322
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(326957..327955)
DNA (999bp) protein (333aa)
Poly (3-hydroxybutyrate) depolymerase n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IFV0_BEII9 rbh
poly (3-hydroxybutyrate) depolymerase
Poly (3-hydroxybutyrate) depolymerase {ECO:0000313|EMBL:ACB95689.1}; Flags: Precursor;; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia
scnpilot_p_inoc_scaffold_59_323
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(328082..329368)
DNA (1287bp) protein (429aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillacea
Putative two-component histidine kinase (Fragment) n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZXU3_9SPHN rbh
cpxA; Sensor protein cpxA
scnpilot_p_inoc_scaffold_59_324
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(329365..330060)
DNA (696bp) protein (232aa)
Putative two-component response regulator n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A647_9SPHN
Putative two-component response regulator {ECO:0000313|EMBL:GAD50213.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" s
two component transcriptional regulator, winged helix family
scnpilot_p_inoc_scaffold_59_325
Sphingobium quisquiliarum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

330178..331629
DNA (1452bp) protein (484aa)
Uncharacterized protein n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0ISG5_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EQB14765.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium qui
RND efflux system outer membrane lipoprotein
scnpilot_p_inoc_scaffold_59_326
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

331626..332708
DNA (1083bp) protein (361aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6E735_9SPHN rbh
secretion protein HlyD
Uncharacterized protein {ECO:0000313|EMBL:EHJ62862.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
scnpilot_p_inoc_scaffold_59_327
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

332713..335838
DNA (3126bp) protein (1042aa)
Cation/multidrug efflux pump acrB n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6E734_9SPHN rbh
Cation/multidrug efflux pump acrB {ECO:0000313|EMBL:EHJ62861.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="N
multidrug transporter AcrB
scnpilot_p_inoc_scaffold_59_328
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(335835..337115)
DNA (1281bp) protein (427aa)
PAS/PAC and Chase sensor-containing diguanylate cyclase/phosphodiesterase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S8F1_9SPHN rbh
PAS/PAC and Chase sensor-containing diguanylate cyclase/phosphodiesterase
PAS/PAC and Chase sensor-containing diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:AGH51238.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingom
scnpilot_p_inoc_scaffold_59_329
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

337431..338066
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CBFF3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD25079.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
scnpilot_p_inoc_scaffold_59_330
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(338189..340606)
DNA (2418bp) protein (806aa)
TonB-denpendent receptor n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI00028873C3 rbh
Putative TonB-dependent receptor {ECO:0000313|EMBL:GAM01332.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphin
TonB-dependent receptor
Displaying items 301-330 of 343 in total

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