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scnpilot_p_inoc_scaffold_59_324

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(329365..330060)

Top 3 Functional Annotations

Value Algorithm Source
Putative two-component response regulator n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A647_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 59.0
  • Coverage: 229.0
  • Bit_score: 259
  • Evalue 3.50e-66
Putative two-component response regulator {ECO:0000313|EMBL:GAD50213.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" s similarity UNIPROT
DB: UniProtKB
  • Identity: 59.0
  • Coverage: 229.0
  • Bit_score: 259
  • Evalue 4.90e-66
two component transcriptional regulator, winged helix family similarity KEGG
DB: KEGG
  • Identity: 57.3
  • Coverage: 232.0
  • Bit_score: 252
  • Evalue 1.60e-64

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Taxonomy

Novosphingobium tardaugens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 696
ATGGAAACACCCGCCTTCAACATTCTGCTGGTCGATGATGATGCCGCCCTCACCCAGATGCTCGCCGAGTATCTGGAGGGCGAAGGCTTTGCCTGCCGCGCGGTGCACAATGCGGCGGGTGGGCGCGAGGCGGCGCTGTCGGGCCTGTATGATGCGGTGATCCTCGACGTGATGCTGCCGGGCGGCAATGGCATCGACCTGTTGCGCCATATCCGGGGCACCAGCGATGTGCCCGTCATCATGCTGACGGCGAAAAGCAACGATACGGAGCGGGTGATCGGGCTGGAGCTGGGCGCGGATGATTATGTGGCCAAGCCCTATTTCCCGCCCGAGCTGGTGGCGCGGCTGCGCGCGGTGCTGCGCCGCCCGGCGCGGCGGGCGGCCAATGGCGATCATCTGCGGCTGGGCGCGCTTTCGCTGGATGCGGCGCGGCGCTGGGCCGGGTGGGAGGGCATGGCGCTGGAATTGACGGCGACCGAGTTCAACCTGCTCGAAATCCTTATCCGCGCGGGCGAACGGGTGTCGACCAAGGATGAATTGTCGCTGCGCCTGCTGGGGCGGCGGCGGGAAAGCTATGACCGCTCTATCGACGTCCACATCTCGAACCTGCGCCAGAAGCTGGAGCGGGCGAGCGGTGAGCGCCTGCGCATCGCCACCTTGCGCGGGATCGGCTGGCGGCTGGAGCAGGCGGCGTGA
PROTEIN sequence
Length: 232
METPAFNILLVDDDAALTQMLAEYLEGEGFACRAVHNAAGGREAALSGLYDAVILDVMLPGGNGIDLLRHIRGTSDVPVIMLTAKSNDTERVIGLELGADDYVAKPYFPPELVARLRAVLRRPARRAANGDHLRLGALSLDAARRWAGWEGMALELTATEFNLLEILIRAGERVSTKDELSLRLLGRRRESYDRSIDVHISNLRQKLERASGERLRIATLRGIGWRLEQAA*