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scnpilot_p_inoc_scaffold_59_274

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(276554..278257)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S1 n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G8Q7_NOVAD similarity UNIREF
DB: UNIREF100
  • Identity: 94.3
  • Coverage: 566.0
  • Bit_score: 1054
  • Evalue 0.0
  • rbh
rpsA; 30S ribosomal protein S1 similarity KEGG
DB: KEGG
  • Identity: 94.3
  • Coverage: 566.0
  • Bit_score: 1054
  • Evalue 0.0
30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphing similarity UNIPROT
DB: UniProtKB
  • Identity: 94.2
  • Coverage: 568.0
  • Bit_score: 1054
  • Evalue 0.0

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Taxonomy

Novosphingobium subterraneum → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1704
ATGAGCACCCCGACCCGCGACGATTTCGCGGCTCTCCTTGACGAATCGCTTGGCGGCGCCGCCAACGGTGGCTTTGAAGGCCGCGTAGTCAAGGGCACCATCACCGCCATCGAGAACGACAAGGCCGTCATCGACGTAGGCCTTAAGAGCGAAGGCCGCGTTCCGCTGCGCGAATTCGCCATGGCCGGTCAGCCCCACGGCCTGAAGGTCGGCGACGAAGTCGAAGTTTTCGTTGACCGCGTCGAAAACGCCGACGGCGAAGCGATGCTCTCGCGTGACCGCGCTCGTCGCGAAGCCGCCTGGGACAAGCTTGAAAACGAATTTGGCGAAGGCAAGCGCGTTGAAGGCGTCATCTTCGGCCGCGTCAAGGGCGGCTTCACCGTTGACCTCGACGGCGCCGTGGCCTTCCTGCCCGGCTCGCAGGTCGACATCCGCCCCGTGCGCGACGTCACCCCGCTGCTCGACGTTCCCCAGCCGTTCCAGATCCTCAAGATGGACCGTCGCCGTGGCAACATCGTCGTGTCGCGCCGCGCCGTTCTGGAAGAAACCCGCGCAGAACAGCGCAGCGGCCTGATCCAGAACCTCTCGGAAGGTCAGATCATCGACGGCGTGGTCAAGAACATCACCGATTACGGTGCGTTCGTTGATCTGGGCGGCATCGACGGCCTGCTGCACGTCACCGACATGAGCTACAAGCGCGTGAACCACCCGAGCGAAGTGATCGCCATCGGCGACACCGTGCGCGTGCAGATCGTCCGCATCAACCAGGACACGCAGCGCATCAGCCTGGGCATGAAGCAGCTGGAATCGGATCCGTGGGATGGCGTTGCCGCCAAGTACCCGGTCGGCGCCAAGCTGCGCGGCACCGTCACGAACATCACCGAATATGGTGCGTTCGTCGAACTGGAAGCCGGCATCGAAGGTCTGGTCCACGTTTCGGAAATGTCCTGGACCAAGAAGAACGTCCACCCCGGCAAGATCGTTTCGACCTCGCAGGAAGTCGACGTGCTGGTGCTGGAAGTCGATTCGGACAAGCGCCGCATCTCGCTCGGCCTCAAGCAGGCCCAGCAGAACCCGTGGGAAGCTTTCGCCGAACGTCACCCGGTTGGTTCGAGCGTCGAAGGCGAAGTTAAGAACGCCACCGAATTCGGCCTCTTCATCGGTCTGGACGGCGAAGTCGACGGCATGGTTCACATGTCGGACATCGCCTGGGGCATCTCGGGCGAAGACGCGCTGGCGCTGCACCGCAAGGGTGAAAGCGTCAAGGCGATCGTTCTGGACGTGGACATCGAAAAGGAGCGTATCTCGCTCGGCATCAAGCAGCTCGAAAAGGGCGCTCCGGCTGCCGGCGGCGTGTCGCCTGCTGGTGGTTCGAACCTGAAGCGCAACGAAGTTGTCACCGTGACCGTGCTCGAAGTGCGTGACGGCGGCCTCGAAGTGCAGGCCGGCGACGATGGCGCCACCGGCTTCATCAAGCGTTCGGATCTGGGTCGCGACCGCGACGAACAGCGCCCCGACCGCTTCCAGGTCGGTCAGAAGATCGACGCCATGGTCACCGGTTTCGACCGTTCGAAGAAGCCCAGCTTCTCGATCAAGGCGCGTCAGCTGCACGAAGAAAAGGAAGCCGTCGAACAGTACGGTTCGTCGGATGCTGGCGCTTCGCTGGGCGACATCCTGGGCGCCGCTCTGAAGGCCAAGCAGTAA
PROTEIN sequence
Length: 568
MSTPTRDDFAALLDESLGGAANGGFEGRVVKGTITAIENDKAVIDVGLKSEGRVPLREFAMAGQPHGLKVGDEVEVFVDRVENADGEAMLSRDRARREAAWDKLENEFGEGKRVEGVIFGRVKGGFTVDLDGAVAFLPGSQVDIRPVRDVTPLLDVPQPFQILKMDRRRGNIVVSRRAVLEETRAEQRSGLIQNLSEGQIIDGVVKNITDYGAFVDLGGIDGLLHVTDMSYKRVNHPSEVIAIGDTVRVQIVRINQDTQRISLGMKQLESDPWDGVAAKYPVGAKLRGTVTNITEYGAFVELEAGIEGLVHVSEMSWTKKNVHPGKIVSTSQEVDVLVLEVDSDKRRISLGLKQAQQNPWEAFAERHPVGSSVEGEVKNATEFGLFIGLDGEVDGMVHMSDIAWGISGEDALALHRKGESVKAIVLDVDIEKERISLGIKQLEKGAPAAGGVSPAGGSNLKRNEVVTVTVLEVRDGGLEVQAGDDGATGFIKRSDLGRDRDEQRPDRFQVGQKIDAMVTGFDRSKKPSFSIKARQLHEEKEAVEQYGSSDAGASLGDILGAALKAKQ*