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scnpilot_p_inoc_scaffold_59_294

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(294217..295182)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00036A8E13 similarity UNIREF
DB: UNIREF100
  • Identity: 55.4
  • Coverage: 327.0
  • Bit_score: 340
  • Evalue 1.70e-90
  • rbh
Thiamin biosynthesis lipoprotein apbE {ECO:0000313|EMBL:GAO55187.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sourc similarity UNIPROT
DB: UniProtKB
  • Identity: 52.5
  • Coverage: 324.0
  • Bit_score: 320
  • Evalue 3.30e-84
thiamine biosynthesis protein ApbE similarity KEGG
DB: KEGG
  • Identity: 56.5
  • Coverage: 292.0
  • Bit_score: 313
  • Evalue 6.20e-83

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 966
ATGATCCGTGTCGCCCTGCCGCCAGTCATTGATGATAATGCCCTGCGCGGTCTGGACCCGAAGGCGCCCGTGGTGGCGCTTTCGGGCCAGACGATGGGGACGGTCTGGCGGGTTCGCGCGGTTTGGCCCCAAGGCCTAGACTCGGCGGATTTGCGCGAGGCGATTGCCGCGCGGCTCGATGATCTGGTGCGCCAGATGAGCCATTGGCAGGCCGACAGCGAGCTTTGCCTTTTCAACAATTTGCAAGGCGGGGAATGGGCGAGCCTTTCGCCGGATTTCGCCCATGTGATGGCCGCCTCGCTCGATCTGGCGCAGGCCAGCGGGGGCGCGTTCAGCCCGGCCATGGGGCGGCTGGTTGATCGCTGGGGCTTTGGCCCGCCCGGCCCTGTGGCCGCGCCGCCCGGTGATGGGGAGATTACCGCGCTGCGCCCCAGTTGCGATGTTTCGCGCCTGGCGTGGGATGGGGCGGCAGCGCGCTTGCGCCAACCGGGGGGCGTGTCGCTCGACCTGTCGGGCATCGCCAAAGGCTACGGCGTCGATGCGCTGGCCGCAATGCTGCGCGCGATGGGGGTGCGGCATGGGCTGGTCGAGGTTGGCGGGGAACTGTCCGGCTGGGGCGTGCAGAGCGATGGCCAGCCATGGTGGGTCGATCTGGAAAATCCGGCGGGCGTGGCGCCCTTGCGAATCGCGCTGCATGGCTTGGCGGTGGCCACTTCGGGCACCTATGTCCGCGGCGGGCATAATCTGGATCCGGCCACCGGTCGCCCGGCGCAAAGCGGGGTTCTGGCCTGCAGCGTGATCCACTCAGAGGCGATGATCGCCGATGGCTGGGCCAGCGCGATGAGCGTGCTGGGGCCGGACCGGGGGCGGGAACTGGCGGATCGACGGGGGCTTTCAGTGCGCTGGGTGATGGAGGACGGGAGCGAGGTGTTGAGCGCGACATTGGTCGATATGATTGCGAATTAG
PROTEIN sequence
Length: 322
MIRVALPPVIDDNALRGLDPKAPVVALSGQTMGTVWRVRAVWPQGLDSADLREAIAARLDDLVRQMSHWQADSELCLFNNLQGGEWASLSPDFAHVMAASLDLAQASGGAFSPAMGRLVDRWGFGPPGPVAAPPGDGEITALRPSCDVSRLAWDGAAARLRQPGGVSLDLSGIAKGYGVDALAAMLRAMGVRHGLVEVGGELSGWGVQSDGQPWWVDLENPAGVAPLRIALHGLAVATSGTYVRGGHNLDPATGRPAQSGVLACSVIHSEAMIADGWASAMSVLGPDRGRELADRRGLSVRWVMEDGSEVLSATLVDMIAN*