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scnpilot_p_inoc_scaffold_59_282

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 284185..284682

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimM n=1 Tax=Novosphingobium sp. PP1Y RepID=F6ILJ5_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 71.2
  • Coverage: 163.0
  • Bit_score: 236
  • Evalue 2.30e-59
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadac similarity UNIPROT
DB: UniProtKB
  • Identity: 71.8
  • Coverage: 163.0
  • Bit_score: 243
  • Evalue 2.00e-61
16S rRNA-processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 71.2
  • Coverage: 163.0
  • Bit_score: 236
  • Evalue 6.40e-60

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Taxonomy

Novosphingobium malaysiense → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 498
ATGAGCCGGCCCGTGACAATGGCCGCTGTTGCGGCGGCCCATGGCATCACGGGCGAGGTTCGTCTCAAGCTGTTTGGTGAAGGTGTGGCCGCGCTCAAGGGCTACCGCACCTTCAACAATGGCGCGCTGACGCTGAAATCGATCAAGGATGACGGCAAGGGGGGCGCTCTGGCCCGCTTTGCCGAAGTCCCTGATCGAACGGCGGCGGAAAAATTGCGCGGGACGGCGCTGACGGTCCCCCGCTCGGCCATGCCGCCGCTGGCGCCGGGTGAGTATTATTACGCCGACCTGCTGGGTCTGGCGGCCCAATCCACCACGGGTGCGATGCTGGGCACGGTGGTCGCGGTCGACAATTTCGGCGCGGGCGACATTCTGGAAATCGAGATGCCTGCGGGCGAGGACGGCAAGAGCCACCGCTTCATGGTGCCCATGCGCGCCGAGGCCGTGCCCGAATGGGACGAGGCGCGGGTGTTGATCGAGGACGCCTACGTCGGGTGA
PROTEIN sequence
Length: 166
MSRPVTMAAVAAAHGITGEVRLKLFGEGVAALKGYRTFNNGALTLKSIKDDGKGGALARFAEVPDRTAAEKLRGTALTVPRSAMPPLAPGEYYYADLLGLAAQSTTGAMLGTVVAVDNFGAGDILEIEMPAGEDGKSHRFMVPMRAEAVPEWDEARVLIEDAYVG*