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scnpilot_p_inoc_scaffold_59_210

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(207226..208422)

Top 3 Functional Annotations

Value Algorithm Source
secretion protein HlyD n=1 Tax=Sphingomonas melonis RepID=UPI0003820634 similarity UNIREF
DB: UNIREF100
  • Identity: 59.2
  • Coverage: 390.0
  • Bit_score: 437
  • Evalue 1.20e-119
  • rbh
HlyD secretion family protein {ECO:0000313|EMBL:EZP51661.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingom similarity UNIPROT
DB: UniProtKB
  • Identity: 61.2
  • Coverage: 384.0
  • Bit_score: 452
  • Evalue 5.20e-124
secretion protein HlyD family protein similarity KEGG
DB: KEGG
  • Identity: 59.6
  • Coverage: 369.0
  • Bit_score: 432
  • Evalue 1.50e-118

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Taxonomy

Sphingomonas sp. RIT328 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1197
ATGAACCAGCAAAACCATTCTTTTGACAAGGACAATACCTCCGCCATGGCCGACAGCTACAGCCCTCCCCCGGCCAAGAACGCCGCCCGCCGCAAAGGCCTTTTGATGCTGGGCGTGGCGGCTCTGGTCGGCCTTGCCGGTTACGGTGTCTATACGATGATGAGCGCGGCCAACGAGGAAACCGATGACGCCTATGTCGCGGGCAATGTCACGCAGATCACCGCGCGCGATCCCGGCACCGTCATTGCAGTCCATGCCGAAAGCACGCAGGGCGTCAAGGCGGGCCAGCCGCTGGTCGATCTAGATCCGGCGCTGGCGGATGCGCAACTGGCCGCGGCCGAGGCCGAACTGGCCCGCGCGGCGCGCACGGTGCGCTCGGGCTTTACCAAGGTGGGCACTGCCGATGCCGAAATCGCGCAGGCCGAGGTTCGCCTTGCCGCCGCCAGGAGCGATCTGACGCGCCGCGAAAAGGCTGTCTCCTCGGGCGCCATTTCCGCCGAAGAAGTCGCCCATGCCGGCGAGGCCGTGCGCATGGCGCAGGCCAATCTGGATCTGGCGCGCAGTCATCGAGCGGACGCGGAAAGCACCGTGGGCGGCACCGATGTGGCGGGCAATCCGGCGGTTCTGGCCGCGATCGCGGCGGTCAAGCGCGCGGCCATCGTGCGCTCGCATATGCATCTTTCCTCGCCGGTCGATGGCGTGGTGGCCCAGCGCGCCGCGCAGGTGGGCCAGCAGGTTGCGCCCGGCGCGCCGCTGATGTCGGTGGTGCCGCTGCGCAAGGTCTGGGTGGACGCCAATTTCCGCGAGACGCAGCTGGCCAATCTACGCATCGGGCAATCGGCCACACTGCATTCCGACGCCTATGGCAAGAAGGTGGTGTTCCACGGCAAGGTCATCGGCCTTTCGGCCGGTTCGGGCGCGGCCTTCGCGCTGCTGCCCGCGCAGAATGCCAGCGGTAACTGGATCAAGGTGGTCCAGCGTGTGCCGGTGCGCATCGCGCTTGACCCCAAGGAATTGGACGCACACCCGCTGCGCCTCGGCCTGTCGGTGACGGTCAAGGTCGACACTTCGCAGGGCACCGGACAGCCTGTGACCGCGATCCCCGCCGCCGCGCAGGCCAGTGAACCCGTCGATACCGTCAGCCCCGAGATCGAGGCGCGCATCCGCCGGATCATCGCGGCAAACGCCGGCCGCTGA
PROTEIN sequence
Length: 399
MNQQNHSFDKDNTSAMADSYSPPPAKNAARRKGLLMLGVAALVGLAGYGVYTMMSAANEETDDAYVAGNVTQITARDPGTVIAVHAESTQGVKAGQPLVDLDPALADAQLAAAEAELARAARTVRSGFTKVGTADAEIAQAEVRLAAARSDLTRREKAVSSGAISAEEVAHAGEAVRMAQANLDLARSHRADAESTVGGTDVAGNPAVLAAIAAVKRAAIVRSHMHLSSPVDGVVAQRAAQVGQQVAPGAPLMSVVPLRKVWVDANFRETQLANLRIGQSATLHSDAYGKKVVFHGKVIGLSAGSGAAFALLPAQNASGNWIKVVQRVPVRIALDPKELDAHPLRLGLSVTVKVDTSQGTGQPVTAIPAAAQASEPVDTVSPEIEARIRRIIAANAGR*