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scnpilot_p_inoc_scaffold_59_206

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(203065..203931)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B70C41 similarity UNIREF
DB: UNIREF100
  • Identity: 63.3
  • Coverage: 289.0
  • Bit_score: 358
  • Evalue 9.00e-96
  • rbh
Transcriptional regulator {ECO:0000313|EMBL:GAO54068.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphin similarity UNIPROT
DB: UniProtKB
  • Identity: 63.3
  • Coverage: 289.0
  • Bit_score: 357
  • Evalue 2.20e-95
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 62.6
  • Coverage: 289.0
  • Bit_score: 347
  • Evalue 3.40e-93

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 867
TTGAACCGCATCGCCCTCTATCACCTTGAAACCCTGCTCTGGATCGCGCGCCTCGGCACCTTTGCAGCGGCGGCGGAGAGACTGAACACCACCCAGCCCACCATCTCGGCCCGCGTACGCGAATTGGAGGCGCAGATCGGCTATCCCCTGTTCCGGCGCGAGGGGCGGCGGATGCTGCTGACGGTGCGCGGGCGGCAATTGGTGCGCGATACCGAACCGCTTTGGGCGGCGCTGGAACGGACGCTGGCGGCGGACAATCTGGCGGGCGCGCGCGGCGTCGTGCGCATCGGCACCGGCGAGATCGCGGCGGCCTCCTGCCTGCCGGGTTTCGTGGCCGAGATCGAGCACGACATGCCCGCTGTGACGCTGGACATCACGATAAGCCTGACCGCACAATTGCTGCAGGATCTGCTGGGCGCAACGAGCGACCTGGTGTTTCTGGCCGGCCCAGTGGCCAGTCCGGGGCTGCAGACCGCATCGATCGGCGGGGTGGCGCTGCAATGGCTGGCCTCACCCACGACGGCGGCGGCTATGCGCGAGGGCGCGACGCCCCCGCTCTGGTCCCTGCCCCGCCAGTCGCCGCTGCATCAGGTCATGCTCGAAACCCTCTCGGGCGATGCCCTACCCGCGATCCGCACCTGCAACAACGCCCGGATGCTGATCGACATCATCGCGGCGGGGCAAGGCATGGCCCTGCTGCCCGAAACCATGACGCGCGAGGCGGTCGCAGACGGGCGGCTGCAGGAAGTGTGGCCCCGGCCAAAACGCGGGATCGAGTTTCAGGCCGCGATCCGGGCCGAGGAGAGCGATCCGCTGGTGCTAGAACTGTTCAGGAGGGCGGCGGGGTTGCGGATTGATCCTCGGTAG
PROTEIN sequence
Length: 289
LNRIALYHLETLLWIARLGTFAAAAERLNTTQPTISARVRELEAQIGYPLFRREGRRMLLTVRGRQLVRDTEPLWAALERTLAADNLAGARGVVRIGTGEIAAASCLPGFVAEIEHDMPAVTLDITISLTAQLLQDLLGATSDLVFLAGPVASPGLQTASIGGVALQWLASPTTAAAMREGATPPLWSLPRQSPLHQVMLETLSGDALPAIRTCNNARMLIDIIAAGQGMALLPETMTREAVADGRLQEVWPRPKRGIEFQAAIRAEESDPLVLELFRRAAGLRIDPR*