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scnpilot_p_inoc_scaffold_187_88

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(86574..87230)

Top 3 Functional Annotations

Value Algorithm Source
TonB family protein n=1 Tax=Novosphingobium sp. AP12 RepID=J2P3F6_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 39.7
  • Coverage: 229.0
  • Bit_score: 157
  • Evalue 1.80e-35
TonB-like protein {ECO:0000313|EMBL:KHS46840.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sub similarity UNIPROT
DB: UniProtKB
  • Identity: 42.0
  • Coverage: 224.0
  • Bit_score: 160
  • Evalue 3.80e-36
TonB-like protein similarity KEGG
DB: KEGG
  • Identity: 41.5
  • Coverage: 224.0
  • Bit_score: 156
  • Evalue 1.10e-35

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Taxonomy

Novosphingobium subterraneum → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 657
ATGACGTATACTGCACAGACAAGTCTTAAGTCCCGTATGGCCTCGCTCGGAGCGGTCGCACTGCTGCATGTCGGCGCGGCGGTGGTGCTGGTCTCGGGCCTTGCCGCCTATCGCGTGATCGCGCCCGAACATCATACCGATGCGGTCAACATGCCGCTGGCGCCCCTGCCCCAGCCCGAGGTGAAGCCCAGCCAGAAGGCCGATGCCAAGCCCGTGCTGGCGCCTGAAACCGTGATTACCCTGCCGCTCGATCCGATGCCGCAGCTCACGGTTGATCCCATGCCCGCGCAGGGGCTGGACATCACCCCCACGGCCACGCCGGAGCCGCGCGCCACCGCCGAACCGGCCCGCCCCCATGGCCAGCCCAAGGCGGCCAGCCCGCGCACGCGTCCGGGCGAATGGGCCAATGAGGACGATTATCCCGCCATGGAATTGCGCATGAATCATGAGGGCGTGGTGCGCTTTCAACTGGCGGTGGGCAGCGATGGCCGCGTCTCCTCCTGCACCGTGGTGCAGAGCAGCGGATGGCCGGGGCTAGATGCCGCCACCTGCGCGCTGGTGACCAAACGCGCCCGGTTCAACCCGGCGCAGGATGAAAGCGGCCAGCCGATGGCGGGCAGCTACAGCAATGCGATCCGCTGGATGATCCCGCGCTGA
PROTEIN sequence
Length: 219
MTYTAQTSLKSRMASLGAVALLHVGAAVVLVSGLAAYRVIAPEHHTDAVNMPLAPLPQPEVKPSQKADAKPVLAPETVITLPLDPMPQLTVDPMPAQGLDITPTATPEPRATAEPARPHGQPKAASPRTRPGEWANEDDYPAMELRMNHEGVVRFQLAVGSDGRVSSCTVVQSSGWPGLDAATCALVTKRARFNPAQDESGQPMAGSYSNAIRWMIPR*