name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
scnpilot_p_inoc_scaffold_187_61
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(64659..65036)
|
Two-component system, PleD family, response regulator DivK n=2 Tax=Novosphingobium RepID=F6IJL0_9SPHN
two-component system PleD family response regulator DivK
Two-component system, PleD family, response regulator DivK {ECO:0000313|EMBL:EHJ61018.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Nov
|
|
scnpilot_p_inoc_scaffold_187_62
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria
|
Not on your lists |
65109..65399
|
hypothetical protein n=1 Tax=Citromicrobium sp. JLT1363 RepID=UPI000225E70B
Uncharacterized protein {ECO:0000313|EMBL:KIY10417.1}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
hypothetical protein
|
|
scnpilot_p_inoc_scaffold_187_63
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
65396..66028
|
Putative uncharacterized protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZDJ9_9SPHN
rbh
Uncharacterized protein {ECO:0000313|EMBL:EGD57260.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
hypothetical protein
|
|
scnpilot_p_inoc_scaffold_187_64
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
66021..66485
|
Endoribonuclease L-PSP n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G3N3_NOVAD
endoribonuclease L-PSP
Endoribonuclease L-PSP {ECO:0000313|EMBL:ABD27540.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobi
|
|
scnpilot_p_inoc_scaffold_187_65
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
66488..67234
|
glycerophosphoryl diester phosphodiesterase n=1 Tax=Novosphingobium nitrogenifigens RepID=UPI000367146E
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:EGD57262.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;"
glycerophosphoryl diester phosphodiesterase
|
|
scnpilot_p_inoc_scaffold_187_66
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
67231..68370
|
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0HSN9_9SPHN
rbh
Uncharacterized protein {ECO:0000313|EMBL:EQB19336.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
hypothetical protein
|
|
scnpilot_p_inoc_scaffold_187_67
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(68372..68818)
|
Sel1 repeat-containing protein n=2 Tax=Novosphingobium RepID=F6IJK5_9SPHN
hypothetical protein
Sel1 repeat-containing protein {ECO:0000313|EMBL:EHJ61024.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novo
|
|
scnpilot_p_inoc_scaffold_187_68
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
69024..69482
|
molecular chaperone DnaK n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B5CE59
RNA polymerase-binding transcription factor DksA {ECO:0000256|HAMAP-Rule:MF_00926}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphin
TraR/DksA family transcriptional regulator
|
|
scnpilot_p_inoc_scaffold_187_69
unknown
|
Not on your lists |
69448..69552
|
This feature has no annotations |
|
scnpilot_p_inoc_scaffold_187_70
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
69585..69992
|
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A2Y0_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AKH43495.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Alterer
hypothetical protein
|
|
scnpilot_p_inoc_scaffold_187_71
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
70077..71561
|
ABC-type oligopeptide transport system, periplasmic component n=1 Tax=Novosphingobium sp. AP12 RepID=J2ZP45_9SPHN
ABC-type oligopeptide transport system, periplasmic component {ECO:0000313|EMBL:EJL21111.1}; Flags: Precursor;; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales;
ABC transporter substrate-binding protein
|
|
scnpilot_p_inoc_scaffold_187_72
Erythrobacter sp. JL475, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
71710..72405
|
DNA-binding response regulator CtrA n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PA50_9SPHN
Chemotaxis protein CheY {ECO:0000313|EMBL:KEO86590.1}; TaxID=383381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter
two component transcriptional regulator
|
|
scnpilot_p_inoc_scaffold_187_73
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(72476..72652)
|
hypothetical protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B31496
Uncharacterized protein {ECO:0000313|EMBL:EKU72781.1}; TaxID=883163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yano
|
|
scnpilot_p_inoc_scaffold_187_74
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
72735..73454
|
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; t
trmB; tRNA (guanine-N(7)-)-methyltransferase (EC:2.1.1.33)
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Sphingomonas sp. LH128 RepID=J8VBC3_9SPHN
rbh
|
|
scnpilot_p_inoc_scaffold_187_75
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
73597..74367
|
Transcriptional regulator, DeoR family n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TXN6_9BRAD
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:CCE11224.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bra
DeoR family transcriptional regulator
|
|
scnpilot_p_inoc_scaffold_187_76
Burkholderia phymatum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
74384..75523
|
Major facilitator superfamily MFS_1 n=1 Tax=Burkholderia phymatum (strain DSM 17167 / STM815) RepID=B2JVI1_BURP8
rbh
major facilitator transporter
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACC74958.1}; TaxID=391038 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkho
|
|
scnpilot_p_inoc_scaffold_187_77
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
75687..76949
|
putative sensor histidine kinase, putative diguanylate cyclase (GGDEF) domain n=1 Tax=Citromicrobium bathyomarinum RepID=UPI0001DD0EA9
rbh
Diguanylate cyclase {ECO:0000313|EMBL:KHS47009.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium s
diguanylate cyclase
|
|
scnpilot_p_inoc_scaffold_187_78
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(76946..77452)
|
GCN5-related N-acetyltransferase n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TX10_TISMK
yncA; N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:AFK57298.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrell
|
|
scnpilot_p_inoc_scaffold_187_79
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(77513..79789)
|
Malic enzyme {ECO:0000313|EMBL:KHS47674.1}; EC=1.1.1.40 {ECO:0000313|EMBL:KHS47674.1};; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosph
malic enzyme (EC:1.1.1.40)
Allosteric NADP-dependent malic enzyme n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G347_NOVAD
|
|
scnpilot_p_inoc_scaffold_187_80
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
79984..82509
|
DNA mismatch repair protein MutS n=1 Tax=Novosphingobium sp. AP12 RepID=J2GEW3_9SPHN
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada
DNA mismatch repair protein MutS
|
|
scnpilot_p_inoc_scaffold_187_81
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
82560..82754
|
Uncharacterized protein {ECO:0000313|EMBL:CCA91081.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
|
|
scnpilot_p_inoc_scaffold_187_82
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(82758..83168)
|
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UYE1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KGB58061.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s
hypothetical protein
|
|
scnpilot_p_inoc_scaffold_187_83
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(83252..84127)
|
3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.35)
Putative 3-hydroxybutyryl-coa dehydrogenase protein n=2 Tax=Novosphingobium nitrogenifigens RepID=F1Z6M8_9SPHN
Putative 3-hydroxybutyryl-coa dehydrogenase protein {ECO:0000313|EMBL:EGD59688.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingo
|
|
scnpilot_p_inoc_scaffold_187_84
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(84142..84714)
|
cob(I)alamin adenosyltransferase (EC:2.5.1.17)
ATP:cob(I)alamin adenosyltransferase n=1 Tax=Novosphingobium sp. AP12 RepID=J2FV10_9SPHN
Scaffold4, whole genome shotgun sequence {ECO:0000313|EMBL:KIS32654.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" so
|
|
scnpilot_p_inoc_scaffold_187_85
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(84734..84967)
|
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A2Y5_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAO54084.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
hypothetical protein
|
|
scnpilot_p_inoc_scaffold_187_86
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(84986..85843)
|
Glutamyl-tRNA synthetase, class Ic n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IFL1_9SPHN
rbh
glutamyl-tRNA synthetase
rbh
Glutamyl-tRNA synthetase, class Ic {ECO:0000313|EMBL:CCA91086.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="N
|
|
scnpilot_p_inoc_scaffold_187_87
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
85946..86554
|
HNH endonuclease n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9L0D3_9SPHN
rbh
HNH endonuclease {ECO:0000313|EMBL:EIZ77689.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp.
MFS transporter
rbh
|
|
scnpilot_p_inoc_scaffold_187_88
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(86574..87230)
|
TonB family protein n=1 Tax=Novosphingobium sp. AP12 RepID=J2P3F6_9SPHN
TonB-like protein {ECO:0000313|EMBL:KHS46840.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sub
TonB-like protein
|
|
scnpilot_p_inoc_scaffold_187_89
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
87393..88049
|
MOSC domain-containing protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8VN39_9SPHN
MOSC domain-containing protein Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
MOSC domain-containing protein
|
|
scnpilot_p_inoc_scaffold_187_90
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(88046..89560)
|
RNA polymerase factor sigma-54 (EC:2.7.7.6)
RNA polymerase sigma-54 factor n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GBM8_NOVAD
rbh
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="No
|