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scnpilot_p_inoc_scaffold_187_98

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 97163..98227

Top 3 Functional Annotations

Value Algorithm Source
Peptide chain release factor 1 n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=RF1_NOVAD similarity UNIREF
DB: UNIREF100
  • Identity: 85.5
  • Coverage: 352.0
  • Bit_score: 599
  • Evalue 2.20e-168
  • rbh
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; similarity UNIPROT
DB: UniProtKB
  • Identity: 87.3
  • Coverage: 354.0
  • Bit_score: 608
  • Evalue 6.60e-171
prfA; peptide chain release factor 1 similarity KEGG
DB: KEGG
  • Identity: 85.5
  • Coverage: 352.0
  • Bit_score: 599
  • Evalue 6.20e-169

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1065
ATGACCATCCCTTCGACTCGTCTGGCCCAGATTTCGGCGCGTTTTGCCGAGCTGGAGGCGCGTCTGGCCTCCGGCACGCTGGAGGGGGCCGATTTCGTGGCGGCGTCCCGCGATTATGCCGAGCTGGAGCCGGTGGCCCGCGCGGCATCGGAAGTGGCGACAATGCGCGGCGAGCTGGAAAGCCTTGCCGCGCTGGATGATCCGGACATGCGCGAGCTGGCAGAGGAGGAGATCGCCCGCATCCGCACGGCGCTGCCCGAGGCCGAGCGCGCGCTGTCCATCGCCATGCTGCCGCGCGATAATGCCGACAGCCGCCCGGCCATGCTGGAAATCCGCGCCGGAACCGGGGGAGACGAGGCCGCCCTGTTCGCCGCCGACCTGTTCCGCATGTATGAACGCTATGCCGCCGAGCAGGGCTGGCGGGTCGAAATGGTCAGCGCGAACGCCAGCGAGATCGGCGGCTTCAAGGAAGTGGTCGCCCATGTCAGCGGGCAGGGCGTGTTCGCCAAGCTGAAGTTCGAATCCGGCGTTCATCGGGTCCAGCGCGTGCCCGTGACGGAAAGCGGCGGGCGCATTCATACCAGCGCGGCCACGGTCGCCATCCTGCCCGAACCGGACGAGGTGGATGTGCAGATCGAGGACAAGGACCTCAAGATCGACGTCTACCGCGCGAGCGGCGCGGGCGGGCAGCACGTCAACACCACCGATTCGGCCGTGCGCATCACCCACCTGCCCACCGGCACCGTCGTCACCTGTCAGGATGCGCGCAGCCAGCACAAGAACAAGGACAAGGCAATGCAGGTCCTGCGTGCCCGCCTGTTCGAGGCCCAGCGCGACGCTGCCCAGGGCGAGGAAGCCGAGGCCCGCAAGGCCATGGTGGGCAGCGGCGACCGATCCGAACGCATCCGCACCTATAATTTCCCGCAAGGCCGCGTGACGGATCACCGGATCAACCTGACGCTCCACCGCCTGCCCGAGATCCTTGAAGGGCCGGGTCTGGGTGAACTGGTCTCGGCGCTGATCCATGAGGATCAGGCCAAAAGGCTGGCGGCGTTGGGTGAATAA
PROTEIN sequence
Length: 355
MTIPSTRLAQISARFAELEARLASGTLEGADFVAASRDYAELEPVARAASEVATMRGELESLAALDDPDMRELAEEEIARIRTALPEAERALSIAMLPRDNADSRPAMLEIRAGTGGDEAALFAADLFRMYERYAAEQGWRVEMVSANASEIGGFKEVVAHVSGQGVFAKLKFESGVHRVQRVPVTESGGRIHTSAATVAILPEPDEVDVQIEDKDLKIDVYRASGAGGQHVNTTDSAVRITHLPTGTVVTCQDARSQHKNKDKAMQVLRARLFEAQRDAAQGEEAEARKAMVGSGDRSERIRTYNFPQGRVTDHRINLTLHRLPEILEGPGLGELVSALIHEDQAKRLAALGE*