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scnpilot_p_inoc_scaffold_187_114

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(118792..120051)

Top 3 Functional Annotations

Value Algorithm Source
Secretion protein HlyD n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z7J0_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 54.2
  • Coverage: 417.0
  • Bit_score: 435
  • Evalue 5.00e-119
  • rbh
Secretion protein HlyD {ECO:0000313|EMBL:EGD59381.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobi similarity UNIPROT
DB: UniProtKB
  • Identity: 54.3
  • Coverage: 414.0
  • Bit_score: 435
  • Evalue 1.20e-118
secretion protein HlyD similarity KEGG
DB: KEGG
  • Identity: 51.3
  • Coverage: 413.0
  • Bit_score: 381
  • Evalue 4.10e-103

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Taxonomy

Novosphingobium nitrogenifigens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1260
GTGACGGATAATCAAGCGGTTGGCACGCTTTCGGTCAAGAATCAGCTTGGCCTTTTGCTCAAGGCGGTGCTGGCAGTGGGGGCGGTTGCGCTTCTGGTGCTGGCCTATCGCCATTTCACGTATAAGGAGCCGGTGGCGCCTGCGCCCCTGCCCGAAGGCATTGTCGAAATGTCGCCATCGCAAATGGCCACGCTCAAGGTCGAGGCCGTGGGCGGGGGCGATGGCTGGCTGCAGACCGCCGCCACCGGCATGATCGCGGTGGATGAAACCCATGCCACGCCGATTTTCCTGCCCTATTCGGGGCAAGTCACGCAGGTGATGGTTCAGCAGGGCGCCACGGTGGTTCAGGGCCAGCCCCTGCTGACCTTGCGCACCAGCGACGTGGTGGACGCGCGCAACGCGCTGTTCGGCGCGGCCGCCGCCCGATCGAGCGCTTTTGCCGCAGCCAAGCTGGCCGAGGAAAACCTCAAGCGCCAGGAACAGATCTATCGCACCGCCGGTGGCGCGCTGCGTGATTATGAACAGGCTCGTAACGATGCCGTCGCCGCCCAGGCCGCGCTGCGCAGCGCCGAGGCCACGCTGGGCGCCGCGCGCGACAAGCTGGAAATCTATGGCAAGAGCCAGGGCGAAATCGCCCGCCTCGAAGGCGCGCATGAGGTCAACGGCTATCACCCCGAAACCACGTTCCGCGCGCCCATCGGCGGGGTCATCGTCAACCGCGCCGTCAGCCCGGGCCAGTTCGTTCAGGTGGGCGGCACCACGCCGGTGCTGACGATCGCCAATCCGGGCCAGGTGTGGCTGGTGGCGCAACTGGCCGAAAGCGACGCGCCCCATGTGCATATGGGCGACCGGGTGGACGTGACCGTCTCGGCCTTCCCCGGCCGCGTGTTTCAGGCCGTGGTCGACAATATCGCCAGCGCGCTTGATCCGCAAAGCCACCGCCTGCCGGTGCGCGCGACGATCGCCAATCCGGACGGGGCGCTCAAGCCGCAGATGTTCGCCAATTTCACCATCCGCCATCAGGACGCCGCCCCCGTCAACGGCCGCCCGGTGATGTCGGTGCCCGCACAGGCCGTGATCCGCGAAAATGACACTGCCCGCGTGTGGATCCAGATTTCGCCCAACCGTTTCCGCTGTGTCGATGTCACGCTGGGCGAAAGCCATAATGGCCGGGTCGATGTGACCTCTGGCCTCAAGGGCGGCGAAAAGGTCGTCACCACCGGCGCTATCTTTGTGAACGAAGCGGGATTCGGCGCGTGA
PROTEIN sequence
Length: 420
VTDNQAVGTLSVKNQLGLLLKAVLAVGAVALLVLAYRHFTYKEPVAPAPLPEGIVEMSPSQMATLKVEAVGGGDGWLQTAATGMIAVDETHATPIFLPYSGQVTQVMVQQGATVVQGQPLLTLRTSDVVDARNALFGAAAARSSAFAAAKLAEENLKRQEQIYRTAGGALRDYEQARNDAVAAQAALRSAEATLGAARDKLEIYGKSQGEIARLEGAHEVNGYHPETTFRAPIGGVIVNRAVSPGQFVQVGGTTPVLTIANPGQVWLVAQLAESDAPHVHMGDRVDVTVSAFPGRVFQAVVDNIASALDPQSHRLPVRATIANPDGALKPQMFANFTIRHQDAAPVNGRPVMSVPAQAVIRENDTARVWIQISPNRFRCVDVTLGESHNGRVDVTSGLKGGEKVVTTGAIFVNEAGFGA*