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scnpilot_p_inoc_scaffold_4049

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_4049_1
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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20..469
DNA (450bp) protein (150aa)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000
seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YL76_9SPHN
scnpilot_p_inoc_scaffold_4049_2
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

484..1236
DNA (753bp) protein (251aa)
5'-nucleotidase SurE {ECO:0000313|EMBL:AKH42545.1}; EC=3.1.3.5 {ECO:0000313|EMBL:AKH42545.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteracea
5'-nucleotidase (EC:3.1.3.5)
5'-nucleotidase SurE n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0JCK3_9SPHN
scnpilot_p_inoc_scaffold_4049_3
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1236..2039
DNA (804bp) protein (268aa)
Membrane protein n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2NDM9_ERYLH
membrane protein
Membrane protein {ECO:0000313|EMBL:ABC62212.1}; TaxID=314225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter litora
scnpilot_p_inoc_scaffold_4049_4
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2039..3091
DNA (1053bp) protein (351aa)
Putative potassium channel protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YLT0_9SPHN rbh
Voltage-gated potassium channel Kch {ECO:0000313|EMBL:AKH42546.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" sou
hypothetical protein
scnpilot_p_inoc_scaffold_4049_5
Erythrobacter sp. NAP1, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3099..3497)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WA97_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EAQ29131.1}; TaxID=237727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter
hypothetical protein
scnpilot_p_inoc_scaffold_4049_6
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3569..4948
DNA (1380bp) protein (460aa)
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=RIMO_NOVAD rbh
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase
rimO; ribosomal protein S12 methylthiotransferase
scnpilot_p_inoc_scaffold_4049_7
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4945..5364
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8VTN9_9SPHN
Secondary thiamine-phosphate synthase enzyme {ECO:0000313|EMBL:EZP80836.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;"
hypothetical protein
scnpilot_p_inoc_scaffold_4049_8
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5587..7023
DNA (1437bp) protein (479aa)
glucose-6-phosphate dehydrogenase (EC:1.1.1.49)
glucose-6-phosphate 1-dehydrogenase n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002E27D27 rbh
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
scnpilot_p_inoc_scaffold_4049_9
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7195..8745
DNA (1551bp) protein (517aa)
phosphogluconate dehydratase (EC:4.2.1.12)
Phosphogluconate dehydratase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YLS6_9SPHN
Phosphogluconate dehydratase {ECO:0000313|EMBL:GAD49347.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosp
scnpilot_p_inoc_scaffold_4049_10
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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8742..8921
DNA (180bp) protein (60aa)
Phosphogluconate dehydratase n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PED2_9SPHN
Scaffold2, whole genome shotgun sequence {ECO:0000313|EMBL:KIS33860.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" so
phosphogluconate dehydratase
scnpilot_p_inoc_scaffold_4049_11
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8924..9907
DNA (984bp) protein (328aa)
Glucokinase {ECO:0000313|EMBL:AKH42557.1}; EC=2.7.1.2 {ECO:0000313|EMBL:AKH42557.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altere
Glucokinase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y827_9SPHN rbh
glucokinase
scnpilot_p_inoc_scaffold_4049_12
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9904..10530
DNA (627bp) protein (209aa)
KDPG aldolase n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2NDP3_ERYLH rbh
KHG/KDPG aldolase {ECO:0000313|EMBL:AKH42558.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrob
KDPG aldolase
scnpilot_p_inoc_scaffold_4049_13
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10544..13327
DNA (2784bp) protein (928aa)
Phosphoenolpyruvate carboxylase {ECO:0000256|SAAS:SAAS00018769}; EC=4.1.1.31 {ECO:0000256|SAAS:SAAS00018769};; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; S
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZVG6_9SPHN rbh
phosphoenolpyruvate carboxylase
scnpilot_p_inoc_scaffold_4049_14
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13412..14209
DNA (798bp) protein (266aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI00035E51CA
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
methyltransferase Fkbm domain-containing protein
scnpilot_p_inoc_scaffold_4049_15
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14302..15015
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=Citromicrobium sp. JLT1363 RepID=UPI000225E049
Uncharacterized protein {ECO:0000313|EMBL:AKH42560.1}; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter
hypothetical protein
scnpilot_p_inoc_scaffold_4049_16
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15135..16073)
DNA (939bp) protein (313aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine
tRNA(Ile)-lysidine synthase n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9WKB9_9SPHN
tRNA(Ile)-lysidine synthetase
scnpilot_p_inoc_scaffold_4049_17
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16098..16526)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2NDP7_ERYLH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC62194.1}; TaxID=314225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter
scnpilot_p_inoc_scaffold_4049_18
Kirrobacter mercurialis, Kirrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(16480..17058)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. AP12 RepID=J2GE63_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KHL24403.1}; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Kirrobacter.;" source="Kirrobacter me
hypothetical protein
scnpilot_p_inoc_scaffold_4049_19
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17191..18060)
DNA (870bp) protein (290aa)
Putative Xre family transcriptional regulator n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YL70_9SPHN
Putative Xre family transcriptional regulator {ECO:0000313|EMBL:GAD49340.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.
hypothetical protein
scnpilot_p_inoc_scaffold_4049_20
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18245..20515)
DNA (2271bp) protein (757aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000313|EMBL:AKH42564.1}; EC=2.7.3.9 {ECO:0000313|EMBL:AKH42564.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomo
PTSINtr with GAF domain, PtsP n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GC94_NOVAD rbh
phosphoenolpyruvate-protein phosphotransferase PtsP
scnpilot_p_inoc_scaffold_4049_21
R_Erythrobacter_63_10, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20610..20765)
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A3M9_9SPHN
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Erythrobacter_63_10_curated
hypothetical protein
scnpilot_p_inoc_scaffold_4049_22
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20978..21175
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GC92_NOVAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KHS47858.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobi
scnpilot_p_inoc_scaffold_4049_23
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21345..21812
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y820_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AKH42567.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Alterer
AraC family transcriptional regulator
scnpilot_p_inoc_scaffold_4049_24
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21809..23296)
DNA (1488bp) protein (496aa)
Glycerol kinase {ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|SAAS:SAAS00029376};; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae
Glycerol kinase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YL66_9SPHN rbh
glycerol kinase
scnpilot_p_inoc_scaffold_4049_25
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23331..24203
DNA (873bp) protein (291aa)
Putative polyketide biosynthesis zinc-dependent hydrolase BaeB {ECO:0000313|EMBL:AKH42568.1}; EC=3.-.-.- {ECO:0000313|EMBL:AKH42568.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobac
Metallo-beta-lactamase family protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PEC1_9SPHN rbh
metallo-beta-lactamase
Displaying 25 items

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