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scnpilot_p_inoc_scaffold_4823

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_4823_1
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..995)
DNA (993bp) protein (331aa)
TonB-dependent siderophore receptor n=1 Tax=Novosphingobium sp. AP12 RepID=J2GGX1_9SPHN
Ferrichrome-iron receptor {ECO:0000313|EMBL:GAO55183.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphin
iron complex outermembrane receptor protein
scnpilot_p_inoc_scaffold_4823_2
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1183..1899)
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00037B81D8
TonB-like protein
TonB-like protein {ECO:0000313|EMBL:BAK68129.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.
scnpilot_p_inoc_scaffold_4823_3
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2023..2526)
DNA (504bp) protein (168aa)
Putative RNA polymerase ECF-type sigma factor n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A6T3_9SPHN
Putative RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:GAD50453.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.
RNA polymerase sigma-70 factor
scnpilot_p_inoc_scaffold_4823_4
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2523..3197)
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YP90_9SPHN
peptidase M23 Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
hypothetical protein
scnpilot_p_inoc_scaffold_4823_5
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3337..4161
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0K629_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EQB32124.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium umm
aldolase
scnpilot_p_inoc_scaffold_4823_6
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4167..4997
DNA (831bp) protein (277aa)
Putative inositol-1-monophosphatase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YNM8_9SPHN rbh
putative inositol monophosphatase Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
inositol monophosphatase
scnpilot_p_inoc_scaffold_4823_7
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4994..6877
DNA (1884bp) protein (628aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZYJ5_9SPHN rbh
capsule biosynthesis protein
Capsule biosynthesis protein {ECO:0000313|EMBL:AJP71268.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomo
scnpilot_p_inoc_scaffold_4823_8
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6874..7902
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0J5P8_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EQB32122.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium umm
lipopolysaccharide biosynthesis protein
scnpilot_p_inoc_scaffold_4823_9
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7899..8849
DNA (951bp) protein (317aa)
Putative glycosyltransferase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YP86_9SPHN rbh
Putative glycosyltransferase {ECO:0000313|EMBL:GAD50447.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosp
glycosyl transferase family protein
scnpilot_p_inoc_scaffold_4823_10
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8846..10174
DNA (1329bp) protein (443aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YAK7_9SPHN rbh
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
hypothetical protein
scnpilot_p_inoc_scaffold_4823_11
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10171..11181
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0ITG1_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EQB32120.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium umm
epimerase
Displaying 11 items

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