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scnpilot_p_inoc_scaffold_4967

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_4967_1
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..395)
DNA (393bp) protein (131aa)
Putative peptidoglycan-associated lipoprotein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YB37_9SPHN
Putative peptidoglycan-associated lipoprotein {ECO:0000313|EMBL:GAD50666.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.
peptidoglycan-associated lipoprotein
scnpilot_p_inoc_scaffold_4967_2
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(465..1847)
DNA (1383bp) protein (461aa)
Protein TolB 2 n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=TOLB2_NOVAD rbh
Translocation protein TolB {ECO:0000313|EMBL:AKH44091.1}; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobac
tolB; translocation protein TolB
scnpilot_p_inoc_scaffold_4967_3
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1844..2725)
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZZ43_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:GAD50664.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
hypothetical protein
scnpilot_p_inoc_scaffold_4967_4
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2736..3188)
DNA (453bp) protein (151aa)
Protein TolR n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A7D0_9SPHN
Protein TolR {ECO:0000313|EMBL:GAD50663.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardau
biopolymer transporter TolR
scnpilot_p_inoc_scaffold_4967_5
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3188..3889)
DNA (702bp) protein (234aa)
TolQ, tolQ protein n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2N8J3_ERYLH rbh
Biopolymer transport protein ExbB {ECO:0000313|EMBL:AKH44088.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" sourc
TolQ, tolQ protein
scnpilot_p_inoc_scaffold_4967_6
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3886..4353)
DNA (468bp) protein (156aa)
Acyl-CoA thioester hydrolase YbgC {ECO:0000313|EMBL:AKH44087.1}; EC=3.1.2.- {ECO:0000313|EMBL:AKH44087.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Eryt
4-hydroxybenzoyl-CoA thioesterase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G9L5_NOVAD
thioesterase
scnpilot_p_inoc_scaffold_4967_7
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4445..4822)
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B512DA
Sphingomonas taxi strain 30a NODE_10, whole genome shotgun sequence {ECO:0000313|EMBL:KIU28601.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada
hypothetical protein
scnpilot_p_inoc_scaffold_4967_8
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4822..5136)
DNA (315bp) protein (105aa)
Phosphoribosyl-ATP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01020, ECO:0000256|SAAS:SAAS00071052}; Short=PRA-PH {ECO:0000256|HAMAP-Rule:MF_01020};; EC=3.6.1.31 {ECO:0000256|HAMAP-Rule:MF_01020, ECO:
hisE; phosphoribosyl-ATP pyrophosphatase (EC:3.6.1.31)
Phosphoribosyl-ATP pyrophosphatase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZZ38_9SPHN
scnpilot_p_inoc_scaffold_4967_9
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5212..5970)
DNA (759bp) protein (253aa)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP
cyclase HisF (EC:4.1.3.-)
Imidazole glycerol phosphate synthase subunit HisF n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A7C4_9SPHN rbh
scnpilot_p_inoc_scaffold_4967_10
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6086..6814)
DNA (729bp) protein (243aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC:5.3.1.16)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Novosphingobium sp. AP12 RepID=J2ZZ91_9SPHN rbh
scnpilot_p_inoc_scaffold_4967_11
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6811..7440)
DNA (630bp) protein (210aa)
Imidazole glycerol phosphate synthase subunit HisH 1 {ECO:0000313|EMBL:AKH44081.1}; EC=2.4.2.- {ECO:0000313|EMBL:AKH44081.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sph
hisH; imidazole glycerol phosphate synthase subunit HisH (EC:2.4.2.-)
Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YB29_9SPHN
scnpilot_p_inoc_scaffold_4967_12
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7433..7630)
DNA (198bp) protein (66aa)
Imidazoleglycerol-phosphate dehydratase {ECO:0000313|EMBL:AKH44080.1}; EC=4.2.1.19 {ECO:0000313|EMBL:AKH44080.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadale
imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19)
Imidazoleglycerol-phosphate dehydratase n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PAK6_9SPHN
Displaying 12 items

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