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scnpilot_p_inoc_scaffold_847

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_847_1
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(222..1340)
DNA (1119bp) protein (373aa)
assimilatory nitrate reductase (NADH) subunit alpha apoprotein (EC:1.7.1.1)
Putative anaerobic dehydrogenase n=1 Tax=Novosphingobium sp. AP12 RepID=J3AFZ3_9SPHN
Putative anaerobic dehydrogenase {ECO:0000313|EMBL:EJL31311.1}; Flags: Precursor;; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphing
scnpilot_p_inoc_scaffold_847_2
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1388..2362)
DNA (975bp) protein (325aa)
assimilatory nitrate reductase (NADH) subunit alpha apoprotein (EC:1.7.1.1)
Putative anaerobic dehydrogenase n=1 Tax=Novosphingobium sp. AP12 RepID=J3AFZ3_9SPHN
Nitrate reductase {ECO:0000313|EMBL:KHK93220.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium m
scnpilot_p_inoc_scaffold_847_3
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2368..2721)
DNA (354bp) protein (118aa)
Assimilatory nitrite reductase (NAD(P)H) small subunit {ECO:0000313|EMBL:ABD27402.1}; EC=1.7.1.4 {ECO:0000313|EMBL:ABD27402.1};; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sp
Assimilatory nitrite reductase (NAD(P)H) small subunit n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G421_NOVAD
nitrite reductase (NAD(P)H) large subunit, NirD
scnpilot_p_inoc_scaffold_847_4
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2718..5198)
DNA (2481bp) protein (827aa)
Nitrite reductase (NAD(P)H) large subunit n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EE97_9SPHN rbh
Nitrite reductase (NAD(P)H) large subunit {ECO:0000313|EMBL:EHJ60320.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" s
nitrite reductase rbh
scnpilot_p_inoc_scaffold_847_5
R_Erythrobacter_63_10, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5431..6648)
DNA (1218bp) protein (406aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IKA7_9SPHN rbh
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Erythrobacter_63_10_curated
hypothetical protein
scnpilot_p_inoc_scaffold_847_6
R_Erythrobacter_63_10, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6796..8481)
DNA (1686bp) protein (562aa)
ABC transporter ATPase; K15578 nitrate/nitrite transport system ATP-binding protein [EC:3.6.3.-] Tax=RIFCSPHIGHO2_12_FULL_Erythrobacter_63_10_curated
ATPase component of various ABC-type transport system n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EE91_9SPHN rbh
ABC transporter ATPase
scnpilot_p_inoc_scaffold_847_7
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8492..9364)
DNA (873bp) protein (291aa)
Sulfonate/nitrate/taurine transport system permease protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EE90_9SPHN rbh
nitrate ABC transporter permease
Nitrate ABC transporter permease {ECO:0000313|EMBL:KHK93662.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="No
scnpilot_p_inoc_scaffold_847_8
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9582..11012)
DNA (1431bp) protein (477aa)
Histidine kinase n=2 Tax=Novosphingobium RepID=F6IKA4_9SPHN rbh
Nitrate ABC transporter substrate-binding protein {ECO:0000313|EMBL:KHK93224.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingob
nitrate ABC transporter substrate-binding protein
scnpilot_p_inoc_scaffold_847_9
R_Erythrobacter_63_10, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11232..12440)
DNA (1209bp) protein (403aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component n=1 Tax=Novosphingobium sp. AP12 RepID=J3AHH5_9SPHN
nitrate transporter component, nrtA; K02049 NitT/TauT family transport system ATP-binding protein Tax=RIFCSPHIGHO2_12_FULL_Erythrobacter_63_10_curated
nitrate transporter component, nrtA
scnpilot_p_inoc_scaffold_847_10
R_Erythrobacter_63_10, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12460..13035)
DNA (576bp) protein (192aa)
chemotaxis protein CheY n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B4B314
response regulator receiver/ANTAR domain-containing protein; K07183 response regulator NasT Tax=RIFCSPHIGHO2_12_FULL_Erythrobacter_63_10_curated
chemotaxis protein CheY
scnpilot_p_inoc_scaffold_847_11
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13124..14095)
DNA (972bp) protein (324aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0003800C19
Putative TetR family transcriptional regulator {ECO:0000313|EMBL:KEZ21433.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" so
scnpilot_p_inoc_scaffold_847_12
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14683..17139
DNA (2457bp) protein (819aa)
UPI0003CFA072 related cluster n=1 Tax=unknown RepID=UPI0003CFA072 rbh
putative signal transduction histidine kinase Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
putative signal transduction histidine kinase
scnpilot_p_inoc_scaffold_847_13
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17129..17776
DNA (648bp) protein (216aa)
UPI0003D04F7C related cluster n=1 Tax=unknown RepID=UPI0003D04F7C
two component LuxR family transcriptional regulator Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
two component LuxR family transcriptional regulator
scnpilot_p_inoc_scaffold_847_14
Blastomonas sp. CACIA14H2, Blastomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18030..18689
DNA (660bp) protein (220aa)
hypothetical protein n=1 Tax=Citromicrobium sp. JLT1363 RepID=UPI000225ED57
Uncharacterized protein {ECO:0000313|EMBL:ESZ88462.1}; TaxID=1419876 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Blastomonas.;" source="Blastomonas sp.
scnpilot_p_inoc_scaffold_847_15
unknown

Not on your lists

18702..19163
DNA (462bp) protein (154aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_847_16
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19327..19947
DNA (621bp) protein (207aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKR6_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK67468.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingo
scnpilot_p_inoc_scaffold_847_17
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20273..22336)
DNA (2064bp) protein (688aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0002D523DC
alcohol dehydrogenase
Alcohol dehydrogenase large subunit {ECO:0000313|EMBL:CCA92076.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="
scnpilot_p_inoc_scaffold_847_18
Burkholderiaceae bacterium 16, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22333..23655)
DNA (1323bp) protein (441aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0003132D03
Uncharacterized protein {ECO:0000313|EMBL:KJK16926.1}; TaxID=1619952 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 16.;
major facilitator superfamily protein
scnpilot_p_inoc_scaffold_847_19
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23805..24731)
DNA (927bp) protein (309aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0002F62A46
helix-turn-helix domain-containing protein
Helix-turn-helix domain-containing protein {ECO:0000313|EMBL:AFU47167.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Aci
scnpilot_p_inoc_scaffold_847_20
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24865..25326
DNA (462bp) protein (154aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IM82_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK65337.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingo
scnpilot_p_inoc_scaffold_847_21
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25434..26915
DNA (1482bp) protein (494aa)
aldehyde dehydrogenase (acceptor); K00146 phenylacetaldehyde dehydrogenase [EC:1.2.1.39] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI00036A4D8C
betaine-aldehyde dehydrogenase
scnpilot_p_inoc_scaffold_847_22
unknown

Not on your lists

26927..27355
DNA (429bp) protein (143aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_847_23
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27355..27804
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0003678893
Uncharacterized protein {ECO:0000313|EMBL:AKH41116.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Alterer
hypothetical protein
scnpilot_p_inoc_scaffold_847_24
Sphingobium quisquiliarum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27810..29414
DNA (1605bp) protein (535aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0002E386DB
Uncharacterized protein {ECO:0000313|EMBL:EQB03815.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium qui
glucose-methanol-choline oxidoreductase
scnpilot_p_inoc_scaffold_847_25
RLO_Sphingomonadales_63_15, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29437..30435
DNA (999bp) protein (333aa)
hypothetical protein n=1 Tax=Sandarakinorhabdus sp. AAP62 RepID=UPI00037F74E7
short chain dehydrogenase Tax=RIFCSPLOWO2_12_FULL_Sphingomonadales_63_15_curated
short chain dehydrogenase
scnpilot_p_inoc_scaffold_847_26
Halomonas anticariensis, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30458..31618)
DNA (1161bp) protein (387aa)
Alginate lyase precursor (EC:4.2.2.3)
Uncharacterized protein n=1 Tax=Halomonas anticariensis FP35 = DSM 16096 RepID=S2L105_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EPC01324.1}; TaxID=1121939 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas anticarie
scnpilot_p_inoc_scaffold_847_27
unknown

Not on your lists

comp(31615..32823)
DNA (1209bp) protein (403aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_847_28
Roseibacterium elongatum, Roseibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32843..34477)
DNA (1635bp) protein (545aa)
hypothetical protein n=1 Tax=Halomonas lutea RepID=UPI00037B3CFF rbh
Alginate biosynthesis protein Alg8 rbh
Alginate biosynthesis protein Alg8 {ECO:0000313|EMBL:AHM03574.1}; TaxID=1294273 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseibacterium.;" source="Ros
scnpilot_p_inoc_scaffold_847_29
unknown

Not on your lists

comp(34502..35197)
DNA (696bp) protein (232aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_847_30
unknown

Not on your lists

comp(35259..35354)
DNA (96bp) protein (32aa)

This feature has no annotations

Displaying items 1-30 of 35 in total

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