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scnpilot_p_inoc_scaffold_869

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_869_1
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..728)
DNA (726bp) protein (242aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002DB8CCB
hypothetical protein
Tax=BJP_IG2102_Porphyrobacter_62_18
scnpilot_p_inoc_scaffold_869_2
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

779..3493
DNA (2715bp) protein (905aa)
Glutamate-ammonia-ligase adenylyltransferase {ECO:0000256|SAAS:SAAS00086160}; EC=2.7.7.42 {ECO:0000256|SAAS:SAAS00086164};; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphing
Glutamate-ammonia-ligase adenylyltransferase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y6G3_9SPHN rbh
glutamate-ammonia-ligase adenylyltransferase
scnpilot_p_inoc_scaffold_869_3
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3490..3966
DNA (477bp) protein (159aa)
Thiol peroxidase, Bcp-type {ECO:0000313|EMBL:GAO54910.1}; EC=1.11.1.15 {ECO:0000313|EMBL:GAO54910.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomo
alkyl hydroperoxide reductase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B780DC
alkyl hydroperoxide reductase
scnpilot_p_inoc_scaffold_869_4
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3996..4790
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZTP4_9SPHN rbh
Rhamnosyltransferase {ECO:0000313|EMBL:KEO96461.1}; TaxID=39960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter lit
rhamnosyltransferase
scnpilot_p_inoc_scaffold_869_5
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5001..5657
DNA (657bp) protein (219aa)
Membrane protein n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2N6Y3_ERYLH
membrane protein
Membrane protein {ECO:0000313|EMBL:ABC64558.1}; TaxID=314225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter litora
scnpilot_p_inoc_scaffold_869_6
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5808..6680)
DNA (873bp) protein (291aa)
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000313|EMBL:AKH43158.1}; EC=2.7.7.9 {ECO:0000313|EMBL:AKH43158.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomona
UTP--glucose-1-phosphate uridylyltransferase n=1 Tax=Citromicrobium bathyomarinum RepID=UPI0001DD0CA4 rbh
phosphomannomutase
scnpilot_p_inoc_scaffold_869_7
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6782..8065
DNA (1284bp) protein (428aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylp
UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y6F6_9SPHN rbh
scnpilot_p_inoc_scaffold_869_8
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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8134..8379
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YJV5_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KGB53802.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s
scnpilot_p_inoc_scaffold_869_9
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8376..8609)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G3C7_NOVAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD27646.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
scnpilot_p_inoc_scaffold_869_10
Kirrobacter mercurialis, Kirrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8614..10011)
DNA (1398bp) protein (466aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=1572751 species="Bacteria; Prot
class II fumarate hydratase (EC:4.2.1.2)
Fumarate hydratase class II n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IHE7_9SPHN rbh
scnpilot_p_inoc_scaffold_869_11
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10042..10764)
DNA (723bp) protein (241aa)
3-oxoacyl-ACP reductase (EC:1.1.1.100)
3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:ABD27647.1}; EC=1.1.1.100 {ECO:0000313|EMBL:ABD27647.1};; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonad
3-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G3C6_NOVAD rbh
scnpilot_p_inoc_scaffold_869_12
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10895..11656)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YKD6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AKH43163.1}; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter
hypothetical protein
scnpilot_p_inoc_scaffold_869_13
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12079..12513
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y6F2_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AKH43164.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Alterer
hypothetical protein
scnpilot_p_inoc_scaffold_869_14
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


12592..15111
DNA (2520bp) protein (840aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1348853 species="Bacteria; Proteo
leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IFI6_9SPHN rbh
scnpilot_p_inoc_scaffold_869_15
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15108..15605
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5P946_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AKH43166.1}; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter
secreted (periplasmic)-like protein
scnpilot_p_inoc_scaffold_869_16
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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15602..16645
DNA (1044bp) protein (348aa)
DNA polymerase III subunit delta n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A1W2_9SPHN rbh
DNA polymerase III subunit delta {ECO:0000313|EMBL:GAD48743.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="No
DNA polymerase III subunit delta
scnpilot_p_inoc_scaffold_869_17
unknown

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16847..17257
DNA (411bp) protein (137aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_869_18
Kirrobacter mercurialis, Kirrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17506..18201
DNA (696bp) protein (232aa)
Protein GumB n=1 Tax=Sphingomonas sp. LH128 RepID=J8VVI5_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KHL25165.1}; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Kirrobacter.;" source="Kirrobacter me
protein GumB
scnpilot_p_inoc_scaffold_869_19
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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18245..20458
DNA (2214bp) protein (738aa)
Exopolysaccharide biosynthesis protein n=2 Tax=Novosphingobium nitrogenifigens RepID=F1ZDU4_9SPHN rbh
Exopolysaccharide biosynthesis protein {ECO:0000313|EMBL:EGD57219.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sourc
exopolysaccharide biosynthesis protein rbh
scnpilot_p_inoc_scaffold_869_20
Kirrobacter mercurialis, Kirrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20464..21636
DNA (1173bp) protein (391aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZDU5_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KHL24921.1}; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Kirrobacter.;" source="Kirrobacter me
hypothetical protein
scnpilot_p_inoc_scaffold_869_21
Erythrobacter sp. SD-21, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21655..22218)
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Citromicrobium sp. JLT1363 RepID=UPI000225E257
Uncharacterized protein {ECO:0000313|EMBL:EDL49638.1}; TaxID=161528 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter
OstA-like protein
scnpilot_p_inoc_scaffold_869_22
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22219..22863)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZTM9_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAD48739.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
hypothetical protein
scnpilot_p_inoc_scaffold_869_23
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22896..23513)
DNA (618bp) protein (206aa)
Putative 3'-5' exonuclease n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A1V6_9SPHN rbh
3'-5' exonuclease {ECO:0000313|EMBL:KHS42048.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sub
3'-5' exonuclease
scnpilot_p_inoc_scaffold_869_24
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23654..24334
DNA (681bp) protein (227aa)
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBas
Uracil-DNA glycosylase n=1 Tax=Novosphingobium sp. AP12 RepID=J2GET2_9SPHN rbh
uracil-DNA glycosylase
scnpilot_p_inoc_scaffold_869_25
Sphingobium sp. ba1, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24430..25386
DNA (957bp) protein (319aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0003196D77
Uncharacterized protein {ECO:0000313|EMBL:KFL47330.1}; TaxID=1522072 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp.
tfdA; alpha-ketoglutarate-dependent 2,4-dichlorophenoxyacetate dioxygenase
scnpilot_p_inoc_scaffold_869_26
Sphingobium sp. ba1, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25549..26487
DNA (939bp) protein (313aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0003196D77
Uncharacterized protein {ECO:0000313|EMBL:KFL47330.1}; TaxID=1522072 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp.
tfdA; alpha-ketoglutarate-dependent 2,4-dichlorophenoxyacetate dioxygenase
scnpilot_p_inoc_scaffold_869_27

Not on your lists

26561..27916
DNA (1356bp) protein (452aa)
metal-dependent phosphohydrolase n=1 Tax=Methylobacterium sp. 77 RepID=UPI0003701F71
Putative Metal-dependent phosphohydrolase {ECO:0000313|EMBL:CBH98017.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
metal dependent phosphohydrolase
scnpilot_p_inoc_scaffold_869_28
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27921..28850)
DNA (930bp) protein (310aa)
Alpha-ketoglutarate-dependent 2,4-dichlorophenoxyacetate dioxygenase {ECO:0000313|EMBL:AKH43144.1}; EC=1.14.11.- {ECO:0000313|EMBL:AKH43144.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphap
Alpha-ketoglutarate-dependent 2,4-dichlorophenoxyacetate dioxygenase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IME5_9SPHN rbh
tfdA; alpha-ketoglutarate-dependent 2,4-dichlorophenoxyacetate dioxygenase
scnpilot_p_inoc_scaffold_869_29
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28878..29804)
DNA (927bp) protein (309aa)
6-phosphofructokinase (EC:2.7.1.11) rbh
Phosphofructokinase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IP47_9SPHN rbh
Phosphofructokinase {ECO:0000256|PIRNR:PIRNR000535}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobiu
scnpilot_p_inoc_scaffold_869_30
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29831..31267)
DNA (1437bp) protein (479aa)
Glutamate synthase [NADPH] small chain {ECO:0000313|EMBL:AKH43141.1}; EC=1.4.1.13 {ECO:0000313|EMBL:AKH43141.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales
glutamate synthase (NADH) small subunit (EC:1.4.1.14)
Glutamate synthase small subunit n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YJU2_9SPHN rbh
Displaying items 1-30 of 33 in total

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