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scnpilot_p_inoc_scaffold_6430

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_6430_1
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..1061)
DNA (1059bp) protein (353aa)
Outer membrane protein assembly factor BamA n=1 Tax=Novosphingobium sp. PP1Y RepID=F6ILL5_9SPHN
surface antigen (D15)
Outer membrane protein assembly factor BamA {ECO:0000256|HAMAP-Rule:MF_01430, ECO:0000256|SAAS:SAAS00011174}; Flags: Precursor;; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sp
scnpilot_p_inoc_scaffold_6430_2
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1229..2338)
DNA (1110bp) protein (370aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadac
Peptidase M50 family protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YHG3_9SPHN rbh
peptidase RseP
scnpilot_p_inoc_scaffold_6430_3
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2342..3493)
DNA (1152bp) protein (384aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000313|EMBL:AKH41885.1}; EC=1.1.1.267 {ECO:0000313|EMBL:AKH41885.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphing
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G8K4_NOVAD rbh
scnpilot_p_inoc_scaffold_6430_4
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3493..4233)
DNA (741bp) protein (247aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales;
Phosphatidate cytidylyltransferase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G8K5_NOVAD
phosphatidate cytidylyltransferase
scnpilot_p_inoc_scaffold_6430_5
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4235..5008)
DNA (774bp) protein (258aa)
Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) {ECO:0000313|EMBL:AKH41887.1}; EC=2.5.1.31 {ECO:0000313|EMBL:AKH41887.1};; TaxID=1267766 species="Bacteria; Pr
undecaprenyl pyrophosphate synthetase (EC:2.5.1.31)
Isoprenyl transferase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZYH0_9SPHN rbh
scnpilot_p_inoc_scaffold_6430_6
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5005..5562)
DNA (558bp) protein (186aa)
Ribosome-recycling factor n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZQC5_9SPHN rbh
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=1219035 species="Bacteria;
frr; ribosome recycling factor
scnpilot_p_inoc_scaffold_6430_7
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5587..6300)
DNA (714bp) protein (238aa)
Uridylate kinase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YHG6_9SPHN rbh
pyrH; uridylate kinase
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
Displaying 7 items

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